RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CDC37Q16543 378 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-202ENST00000535906 SV2BQ7L1I2 683 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 HPS3Q969F9 1004 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 EEF2KMTQ96G04 330 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 TRIM47Q96LD4 638 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 NUP88Q99567 741 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-202ENST00000535906 DUSP9Q99956 384 aaKnown RBP14.98□□□□□ -0.01
VPS33B-202ENST00000535906 STK32BQ9NY57 414 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 ATRNL1Q5VV63 1379 aa14.98□□□□□ -0.01
VPS33B-202ENST00000535906 UTP14CQ5TAP6 766 aaKnown RBP14.97□□□□□ -0.01
VPS33B-202ENST00000535906 RAD9BQ6WBX8 426 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 DHTKD1Q96HY7 919 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-202ENST00000535906 RAB34Q9BZG1 259 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 THAP9Q9H5L6 903 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 MYMKA6NI61 221 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 ENTPD3O75355 529 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 URI1O94763 535 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-202ENST00000535906 SNAP25P60880 206 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 UBXN1Q04323 297 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 CC2D2BQ6DHV5 1058 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 CNGA4Q8IV77 575 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 SUPT20HQ8NEM7 779 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 SNX29Q8TEQ0 813 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 LARP4BQ92615 738 aaKnown RBP14.97□□□□□ -0.01
VPS33B-202ENST00000535906 CCDC47Q96A33 483 aaKnown RBP14.97□□□□□ -0.01
VPS33B-202ENST00000535906 CSRNP1Q96S65 589 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 NAA15Q9BXJ9 866 aaKnown RBP14.97□□□□□ -0.01
VPS33B-202ENST00000535906 GTPBP4Q9BZE4 634 aaKnown RBP14.97□□□□□ -0.01
VPS33B-202ENST00000535906 STK17AQ9UEE5 414 aa14.97□□□□□ -0.01
VPS33B-202ENST00000535906 GH2P01242 217 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 ECM1Q16610 540 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 ANKRD40Q6AI12 368 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 KCNK18Q7Z418 384 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 KIAA0895Q8NCT3 520 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 P2RX5Q93086 422 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 CDK5RAP3Q96JB5 506 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 FAM53CQ9NYF3 392 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 NDUFB10O96000 172 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 CCNE1P24864 410 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 EEF1GP26641 437 aaKnown RBP14.96□□□□□ -0.01
VPS33B-202ENST00000535906 GNG11P61952 73 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 KRT79Q5XKE5 535 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 DYMQ7RTS9 669 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 CSGALNACT2Q8N6G5 542 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 GMCL1P1Q8NEA9 526 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 UIMC1Q96RL1 719 aa14.96□□□□□ -0.01
VPS33B-202ENST00000535906 ARFGEF1Q9Y6D6 1849 aa14.96□□□□□ -0.02
VPS33B-202ENST00000535906 MEIS2O14770 477 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 GCFC2P16383 781 aaKnown RBP14.95□□□□□ -0.02
VPS33B-202ENST00000535906 CASQ1P31415 396 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 ARHGAP29Q52LW3 1261 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 MNS1Q8NEH6 495 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 UBXN4Q92575 508 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 RAD54LQ92698 747 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 MRPL44Q9H9J2 332 aaKnown RBP14.95□□□□□ -0.02
VPS33B-202ENST00000535906 SLC39A2Q9NP94 309 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 RGS17Q9UGC6 210 aaPredicted RBP14.95□□□□□ -0.02
VPS33B-202ENST00000535906 PCDHA12Q9UN75 941 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 A0A1W2PRG0 241 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 EFCAB8A8MWE9 144 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 TCP10L2B9ZVM9 353 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 FECHP22830 423 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 TMEM119Q4V9L6 283 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 RBM26Q5T8P6 1007 aaKnown RBP14.95□□□□□ -0.02
VPS33B-202ENST00000535906 CNNM4Q6P4Q7 775 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 MB21D1Q8N884 522 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 ZNF507Q8TCN5 953 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 GMCL1Q96IK5 515 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 WDR24Q96S15 920 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 P2RX7Q99572 595 aaKnown RBP14.95□□□□□ -0.02
VPS33B-202ENST00000535906 ABHD10Q9NUJ1 306 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 ADGRG1Q9Y653 693 aa14.95□□□□□ -0.02
VPS33B-202ENST00000535906 A0A0U1RQJ8 604 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 LGALS16A8MUM7 142 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 TADA3O75528 432 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 RAD17O75943 681 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 TPM1P09493 284 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 CCDC175P0C221 793 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 MAP3K9P80192 1104 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 ATRIPQ8WXE1 791 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 CCDC51Q96ER9 411 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 ANO3Q9BYT9 981 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 GLT8D2Q9H1C3 349 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 ZNF446Q9NWS9 450 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 PRDM4Q9UKN5 801 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 CLRN2A0PK11 232 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 BICDL2A1A5D9 508 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 PES1O00541 588 aaKnown RBP14.94□□□□□ -0.02
VPS33B-202ENST00000535906 MARCH6O60337 910 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 COBLL1Q53SF7 1204 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 UNC13DQ70J99 1090 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 KRT222Q8N1A0 295 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 KIFC2Q96AC6 838 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 CARD6Q9BX69 1037 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 SEMA6BQ9H3T3 888 aa14.94□□□□□ -0.02
VPS33B-202ENST00000535906 MAGEC2Q9UBF1 373 aaPredicted RBP14.94□□□□□ -0.02
VPS33B-202ENST00000535906 PVALEFA0A1B0GWK0 134 aa14.93□□□□□ -0.02
VPS33B-202ENST00000535906 PSMD14O00487 310 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms