RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 TXNP10599 105 aaKnown RBP9.47□□□□□ -0.89
CHFR-211ENST00000535897 POU3F3P20264 500 aaPredicted RBP9.47□□□□□ -0.89
CHFR-211ENST00000535897 MRPL12P52815 198 aaKnown RBP9.47□□□□□ -0.89
CHFR-211ENST00000535897 GRB10Q13322 594 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 PWP2Q15269 919 aaKnown RBP9.47□□□□□ -0.89
CHFR-211ENST00000535897 PTGISQ16647 500 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 TMEM31Q5JXX7 168 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 ZMYM1Q5SVZ6 1142 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 COPS5Q92905 334 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 DCTPP1Q9H773 170 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 MTUS1Q9ULD2 1270 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHFR-211ENST00000535897 TTC41PQ6P2S7 1318 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 SCN10AQ9Y5Y9 1956 aa9.46□□□□□ -0.89
CHFR-211ENST00000535897 RBM47A0AV96 593 aaKnown RBP9.46□□□□□ -0.9
CHFR-211ENST00000535897 A6NJR5 290 aa9.46□□□□□ -0.9
CHFR-211ENST00000535897 ARHGEF15O94989 841 aa9.46□□□□□ -0.9
CHFR-211ENST00000535897 TOP1P11387 765 aaKnown RBP9.46□□□□□ -0.9
CHFR-211ENST00000535897 PTPN11Q06124 597 aaPredicted RBP9.46□□□□□ -0.9
CHFR-211ENST00000535897 USH1GQ495M9 461 aa9.46□□□□□ -0.9
CHFR-211ENST00000535897 CHST3Q7LGC8 479 aa9.46□□□□□ -0.9
CHFR-211ENST00000535897 TMCO2Q7Z6W1 182 aaPredicted RBP9.46□□□□□ -0.9
CHFR-211ENST00000535897 PI4K2BQ8TCG2 481 aa9.46□□□□□ -0.9
CHFR-211ENST00000535897 GDPD5Q8WTR4 605 aa9.46□□□□□ -0.9
CHFR-211ENST00000535897 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.9
CHFR-211ENST00000535897 PNMA2Q9UL42 364 aa9.46□□□□□ -0.9
CHFR-211ENST00000535897 LCHNA4D1U4 455 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 FAM86C2PA6NEL3 165 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 MX1P20591 662 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 RPS6P62753 249 aaKnown RBP9.45□□□□□ -0.9
CHFR-211ENST00000535897 VPS53Q5VIR6 699 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 FAM117BQ6P1L5 589 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 BTNL9Q6UXG8 535 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 SPRED2Q7Z698 418 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 CAGE1Q8TC20 777 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 OTUD7AQ8TE49 926 aaPredicted RBP9.45□□□□□ -0.9
CHFR-211ENST00000535897 AFAP1L1Q8TED9 768 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 CLEC4DQ8WXI8 215 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 TMEM47Q9BQJ4 181 aa9.45□□□□□ -0.9
CHFR-211ENST00000535897 PTPRSQ13332 1948 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 TRIP12Q14669 1992 aaPredicted RBP9.44□□□□□ -0.9
CHFR-211ENST00000535897 TET1Q8NFU7 2136 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 BRWD1Q9NSI6 2320 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 FOXP2O15409 715 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 ORC4O43929 436 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 GH1P01241 217 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 MMP3P08254 477 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 PDHBP11177 359 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 SELPP16109 830 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 HOXD11P31277 338 aaPredicted RBP9.44□□□□□ -0.9
CHFR-211ENST00000535897 WDR5P61964 334 aaKnown RBP9.44□□□□□ -0.9
CHFR-211ENST00000535897 SEPT14Q6ZU15 432 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 LRRC8DQ7L1W4 858 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 C7orf31Q8N865 590 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 DNERQ8NFT8 737 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 AFG1LQ8WV93 481 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 ANAPC4Q9UJX5 808 aa9.44□□□□□ -0.9
CHFR-211ENST00000535897 PIEZO1Q92508 2521 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 WDR19Q8NEZ3 1342 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 DHX16O60231 1041 aaKnown RBP9.43□□□□□ -0.9
CHFR-211ENST00000535897 LPXNO60711 386 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 ARIH2O95376 493 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 GOLGA8HP0CJ92 632 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 CASTP20810 708 aaKnown RBP9.43□□□□□ -0.9
CHFR-211ENST00000535897 EDNRBP24530 442 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 SSTR3P32745 418 aaPredicted RBP9.43□□□□□ -0.9
CHFR-211ENST00000535897 HAND2P61296 217 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 DEFB103AP81534 67 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 ZNF543Q08ER8 600 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
CHFR-211ENST00000535897 CNKSR3Q6P9H4 555 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 KHSRPQ92945 711 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHFR-211ENST00000535897 MUC6Q6W4X9 2439 aa9.43□□□□□ -0.9
CHFR-211ENST00000535897 ABHD14A-ACY1A0A1B0GW23 586 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 LINC01553A4QN01 128 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 GJB5O95377 273 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 PARNO95453 639 aaKnown RBP9.42□□□□□ -0.9
CHFR-211ENST00000535897 CKBP12277 381 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 KCNA5P22460 613 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 NOVP48745 357 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 IKBKEQ14164 716 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 DGKDQ16760 1214 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 LY6KQ17RY6 165 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 DIEXFQ68CQ4 756 aaKnown RBP9.42□□□□□ -0.9
CHFR-211ENST00000535897 MFSD6Q6ZSS7 791 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 EVI5LQ96CN4 794 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 UIMC1Q96RL1 719 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 TGS1Q96RS0 853 aaKnown RBP9.42□□□□□ -0.9
CHFR-211ENST00000535897 RAD9AQ99638 391 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 ALG1Q9BT22 464 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 CPVLQ9H3G5 476 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 UBE2ZQ9H832 354 aaPredicted RBP9.42□□□□□ -0.9
CHFR-211ENST00000535897 SUGCTQ9HAC7 445 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 HELLSQ9NRZ9 838 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 LMCD1Q9NZU5 365 aa9.42□□□□□ -0.9
CHFR-211ENST00000535897 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
CHFR-211ENST00000535897 SIP14410 1827 aa9.41□□□□□ -0.9
CHFR-211ENST00000535897 GPR37L1O60883 481 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms