RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 RRP36Q96EU6 259 aaKnown RBP16.69■□□□□ 0.26
MSRB3-206ENST00000535664 PAWRQ96IZ0 340 aaKnown RBP16.69■□□□□ 0.26
MSRB3-206ENST00000535664 C11orf49Q9H6J7 331 aa16.69■□□□□ 0.26
MSRB3-206ENST00000535664 A1CFQ9NQ94 594 aaKnown RBP16.69■□□□□ 0.26
MSRB3-206ENST00000535664 HOMER2Q9NSB8 354 aa16.69■□□□□ 0.26
MSRB3-206ENST00000535664 DNM1LO00429 736 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 PPP1R11O60927 126 aaPredicted RBP16.68■□□□□ 0.26
MSRB3-206ENST00000535664 F13A1P00488 732 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 RARBP10826 455 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 GUCY1B3Q02153 619 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 RESTQ13127 1097 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 TYW1BQ6NUM6 668 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 FAM133AQ8N9E0 248 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 PIBF1Q8WXW3 757 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 VAT1LQ9HCJ6 419 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 VPS54Q9P1Q0 977 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 FAM184BQ9ULE4 1060 aa16.68■□□□□ 0.26
MSRB3-206ENST00000535664 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
MSRB3-206ENST00000535664 STXBP3O00186 592 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 ZBTB5O15062 677 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 NPY5RQ15761 445 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 CDC37Q16543 378 aaPredicted RBP16.67■□□□□ 0.26
MSRB3-206ENST00000535664 HOMER1Q86YM7 354 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 SAMD3Q8N6K7 520 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 TRPV1Q8NER1 839 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 GPKOWQ92917 476 aaPredicted RBP eCLIP16.67■□□□□ 0.26
MSRB3-206ENST00000535664 TNPO1Q92973 898 aaKnown RBP16.67■□□□□ 0.26
MSRB3-206ENST00000535664 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 SH3GLB2Q9NR46 395 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 BARHL2Q9NY43 387 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 ABCB11O95342 1321 aa16.67■□□□□ 0.26
MSRB3-206ENST00000535664 PNMA6FA0A0J9YX94 578 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 KBTBD13C9JR72 458 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 H3BQV1 296 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 hCG_1984214I3L0E3 225 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 EVI5O60447 810 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 MMP1P03956 469 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 ACVR2BQ13705 512 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 QRICH1Q2TAL8 776 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 NSMFQ6X4W1 530 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 RNF180Q86T96 592 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 FAM177A1Q8N128 213 aaPredicted RBP16.66■□□□□ 0.26
MSRB3-206ENST00000535664 ZNF713Q8N859 430 aaPredicted RBP16.66■□□□□ 0.26
MSRB3-206ENST00000535664 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.66■□□□□ 0.26
MSRB3-206ENST00000535664 MAP3K20Q9NYL2 800 aaKnown RBP16.66■□□□□ 0.26
MSRB3-206ENST00000535664 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
MSRB3-206ENST00000535664 KCNJ14Q9UNX9 436 aa16.66■□□□□ 0.26
MSRB3-206ENST00000535664 MRPL11Q9Y3B7 192 aaKnown RBP16.66■□□□□ 0.26
MSRB3-206ENST00000535664 ZNFX1Q9P2E3 1918 aaKnown RBP16.66■□□□□ 0.26
MSRB3-206ENST00000535664 KIF28PB7ZC32 967 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 ZNF865P0CJ78 1059 aaPredicted RBP16.65■□□□□ 0.26
MSRB3-206ENST00000535664 COL6A1P12109 1028 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 SNAP25P60880 206 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 FOXD4L5Q5VV16 416 aaPredicted RBP16.65■□□□□ 0.26
MSRB3-206ENST00000535664 RNF207Q6ZRF8 634 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 HEATR3Q7Z4Q2 680 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 FBXO11Q86XK2 927 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 DNERQ8NFT8 737 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 FOXD4L4Q8WXT5 416 aaPredicted RBP16.65■□□□□ 0.26
MSRB3-206ENST00000535664 AMNQ9BXJ7 453 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 SPC25Q9HBM1 224 aa16.65■□□□□ 0.26
MSRB3-206ENST00000535664 TNRC18O15417 2968 aaPredicted RBP16.65■□□□□ 0.26
MSRB3-206ENST00000535664 BRCA2P51587 3418 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 ADAMTS3O15072 1205 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 DUSP11O75319 330 aaKnown RBP16.64■□□□□ 0.25
MSRB3-206ENST00000535664 SNAI1O95863 264 aaPredicted RBP16.64■□□□□ 0.25
MSRB3-206ENST00000535664 MNX1P50219 401 aaPredicted RBP16.64■□□□□ 0.25
MSRB3-206ENST00000535664 TRIM29Q14134 588 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 MUM1L1Q5H9M0 696 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 PRAMEF19Q5SWL8 479 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 PPP1R18Q6NYC8 613 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 CLEC17AQ6ZS10 378 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 ARMCX2Q7L311 632 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 FERMT3Q86UX7 667 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 DAGLBQ8NCG7 672 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 XPNPEP3Q9NQH7 507 aa16.64■□□□□ 0.25
MSRB3-206ENST00000535664 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 ESYT2A0FGR8 921 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 XBP1P17861 261 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 U2AF2P26368 475 aaKnown RBP eCLIP16.63■□□□□ 0.25
MSRB3-206ENST00000535664 BAATQ14032 418 aaPredicted RBP16.63■□□□□ 0.25
MSRB3-206ENST00000535664 IQSEC1Q6DN90 963 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 CCDC148Q8NFR7 591 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 OXER1Q8TDS5 423 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 MORC4Q8TE76 937 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
MSRB3-206ENST00000535664 TSEN34Q9BSV6 310 aaKnown RBP16.63■□□□□ 0.25
MSRB3-206ENST00000535664 ZHX1Q9UKY1 873 aaPredicted RBP16.63■□□□□ 0.25
MSRB3-206ENST00000535664 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
MSRB3-206ENST00000535664 M0R2N6 131 aa16.62■□□□□ 0.25
MSRB3-206ENST00000535664 CNTN2Q02246 1040 aa16.62■□□□□ 0.25
MSRB3-206ENST00000535664 DIS3L2Q8IYB7 885 aaKnown RBP16.62■□□□□ 0.25
MSRB3-206ENST00000535664 DIS3LQ8TF46 1054 aaKnown RBP16.62■□□□□ 0.25
MSRB3-206ENST00000535664 CHAMP1Q96JM3 812 aa16.62■□□□□ 0.25
MSRB3-206ENST00000535664 ZMYND12Q9H0C1 365 aa16.62■□□□□ 0.25
MSRB3-206ENST00000535664 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
MSRB3-206ENST00000535664 VTA1Q9NP79 307 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms