RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PDIA3P30101 505 aaKnown RBP19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 PARD3BQ8TEW8 1205 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 CACTINQ8WUQ7 758 aaKnown RBP19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 FAM149B1Q96BN6 582 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 CHMP6Q96FZ7 201 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 CNOT6LQ96LI5 555 aaKnown RBP19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 DBNDD1Q9H9R9 158 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 FANCLQ9NW38 375 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 ANGPTL3Q9Y5C1 460 aa19.8■□□□□ 0.76
SFSWAP-203ENST00000535236 ADORA1P30542 326 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 IL6STP40189 918 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 DBN1Q16643 649 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 CCDC93Q567U6 631 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 FAM196AQ6ZSG2 479 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 TRIM11Q96F44 468 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 MLH3Q9UHC1 1453 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 WDR62O43379 1518 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 GOLGA8KD6RF30 607 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 GDF11O95390 407 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 PSMC2P35998 433 aaKnown RBP19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 KIAA1841Q6NSI8 718 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 MYRIPQ8NFW9 859 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 RUNDC3BQ96NL0 473 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 WDR11Q9BZH6 1224 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 SLC12A6Q9UHW9 1150 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 BZW2Q9Y6E2 419 aaKnown RBP19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 BLMP54132 1417 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 PLXNC1O60486 1568 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 ZNF449Q6P9G9 518 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 LMNB2Q03252 620 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 KANSL2Q9H9L4 492 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 CLIC4Q9Y696 253 aa19.79■□□□□ 0.76
SFSWAP-203ENST00000535236 PUS3Q9BZE2 481 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 PPME1Q9Y570 386 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 EIF3CLB5ME19 914 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 RBM6P78332 1123 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 MESDQ14696 234 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 UHMK1Q8TAS1 419 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 EIF3CQ99613 913 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 TMCO4Q5TGY1 634 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 PHLDB3Q6NSJ2 640 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 CTTNBP2Q8WZ74 1663 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 BBOX1O75936 387 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 NR2F2P24468 414 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 COPB1P53618 953 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 PDE1BQ01064 536 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 RAB44Q7Z6P3 723 aaPredicted RBP19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 CDHR1Q96JP9 859 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 SMYD2Q9NRG4 433 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 SGK1O00141 431 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 NDUFA8P51970 172 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 NLRP7Q8WX94 980 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 SLC38A10Q9HBR0 1119 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 BAIAP2L1Q9UHR4 511 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 MTMR6Q9Y217 621 aa19.78■□□□□ 0.76
SFSWAP-203ENST00000535236 GPC4O75487 556 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 GSPT1P15170 499 aaKnown RBP19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 TRAPPC10P48553 1259 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 MMEL1Q495T6 779 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 RAPH1Q70E73 1250 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 ASAP1Q9ULH1 1129 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 GNGT1P63211 74 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 CEP170P1Q96L14 293 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 COPRSQ9NQ92 184 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 TMEM63CQ9P1W3 806 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 BMP3P12645 472 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 DCLK2Q8N568 766 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 MCUQ8NE86 351 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 PI4K2BQ8TCG2 481 aa19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 CPSF3Q9UKF6 684 aaKnown RBP19.77■□□□□ 0.76
SFSWAP-203ENST00000535236 INSRP06213 1382 aa19.77■□□□□ 0.75
SFSWAP-203ENST00000535236 ARPP19P56211 112 aa19.77■□□□□ 0.75
SFSWAP-203ENST00000535236 ZNF772Q68DY9 489 aaPredicted RBP19.77■□□□□ 0.75
SFSWAP-203ENST00000535236 GPR108Q9NPR9 543 aa19.77■□□□□ 0.75
SFSWAP-203ENST00000535236 STK17AQ9UEE5 414 aa19.77■□□□□ 0.75
SFSWAP-203ENST00000535236 ZNF233A6NK53 670 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 KRT10P13645 584 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 TMTC4Q5T4D3 741 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 SDCCAG3Q96C92 435 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 HMGB1P1B2RPK0 211 aaPredicted RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 INHBAP08476 426 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 GCFC2P16383 781 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 RXRBP28702 533 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 NAA35Q5VZE5 725 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 AK8Q96MA6 479 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 RNF26Q9BY78 433 aaPredicted RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 RIPOR2Q9Y4F9 1068 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 ATP8B3O60423 1300 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 ASPHQ12797 758 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 FAM186BQ8IYM0 893 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 FOXP1Q9H334 677 aaPredicted RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 ARHGEF37A1IGU5 675 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 MGEA5O60502 916 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 HEXIM1O94992 359 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 FMNL1O95466 1100 aaPredicted RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 SLC16A2P36021 539 aa19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 DYNLL1P63167 89 aaKnown RBP19.76■□□□□ 0.75
SFSWAP-203ENST00000535236 RASSF7Q02833 373 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms