RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CFBP00751 764 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 MAPK4P31152 587 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 RBM10P98175 930 aaKnown RBP14.01□□□□□ -0.17
SCARB1-204ENST00000535005 NR5A1Q13285 461 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 USP17L6PQ6QN14 398 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 RNF207Q6ZRF8 634 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 KRT25Q7Z3Z0 450 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 BRAPQ7Z569 592 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 NOSTRINQ8IVI9 506 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 ABRAQ8N0Z2 381 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 R3HDMLQ9H3Y0 253 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 A1CFQ9NQ94 594 aaKnown RBP14.01□□□□□ -0.17
SCARB1-204ENST00000535005 PFASO15067 1338 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 STRNO43815 780 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 RPS6P62753 249 aaKnown RBP14.01□□□□□ -0.17
SCARB1-204ENST00000535005 MAP2K1Q02750 393 aaPredicted RBP14.01□□□□□ -0.17
SCARB1-204ENST00000535005 UBE2SQ16763 222 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
SCARB1-204ENST00000535005 EFCC1Q9HA90 598 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 CYP39A1Q9NYL5 469 aa14.01□□□□□ -0.17
SCARB1-204ENST00000535005 BIN2Q9UBW5 565 aaPredicted RBP14.01□□□□□ -0.17
SCARB1-204ENST00000535005 SYCE3A1L190 88 aa14□□□□□ -0.17
SCARB1-204ENST00000535005 TRPA1O75762 1119 aa14□□□□□ -0.17
SCARB1-204ENST00000535005 TPM3P06753 285 aa14□□□□□ -0.17
SCARB1-204ENST00000535005 GNL2Q13823 731 aaKnown RBP14□□□□□ -0.17
SCARB1-204ENST00000535005 BAATQ14032 418 aaPredicted RBP14□□□□□ -0.17
SCARB1-204ENST00000535005 NOM1Q5C9Z4 860 aaKnown RBP14□□□□□ -0.17
SCARB1-204ENST00000535005 NSMFQ6X4W1 530 aa14□□□□□ -0.17
SCARB1-204ENST00000535005 FERMT3Q86UX7 667 aa14□□□□□ -0.17
SCARB1-204ENST00000535005 RASGRP4Q8TDF6 673 aa14□□□□□ -0.17
SCARB1-204ENST00000535005 TMEM260Q9NX78 707 aa14□□□□□ -0.17
SCARB1-204ENST00000535005 TBC1D8O95759 1140 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 PTMAP06454 111 aaKnown RBP13.99□□□□□ -0.17
SCARB1-204ENST00000535005 FCER1AP12319 257 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 HOXA13P31271 388 aaPredicted RBP13.99□□□□□ -0.17
SCARB1-204ENST00000535005 KCTD2Q14681 263 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 JAKMIP3Q5VZ66 844 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 SLC30A10Q6XR72 485 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
SCARB1-204ENST00000535005 ANKRD35Q8N283 1001 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 TMEM87AQ8NBN3 555 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 DNAJC25-GNG10A0A024R161 153 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 CCDC194A0A1B0GVG4 234 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 SPDYE3A6NKU9 549 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 PTPREP23469 700 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 NONOQ15233 471 aaKnown RBP eCLIP13.99□□□□□ -0.172e-6■■■□□ 18.3
SCARB1-204ENST00000535005 EARS2Q5JPH6 523 aaKnown RBP13.99□□□□□ -0.17
SCARB1-204ENST00000535005 GPR142Q7Z601 462 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 PLEKHH3Q7Z736 793 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 MMP19Q99542 508 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 ANO3Q9BYT9 981 aa13.99□□□□□ -0.17
SCARB1-204ENST00000535005 FRMPD4Q14CM0 1322 aa13.98□□□□□ -0.17
SCARB1-204ENST00000535005 TRAPPC10P48553 1259 aa13.98□□□□□ -0.17
SCARB1-204ENST00000535005 PIK3AP1Q6ZUJ8 805 aa13.98□□□□□ -0.17
SCARB1-204ENST00000535005 FAM133AQ8N9E0 248 aa13.98□□□□□ -0.17
SCARB1-204ENST00000535005 CRYGNQ8WXF5 182 aa13.98□□□□□ -0.17
SCARB1-204ENST00000535005 ATP6V1DQ9Y5K8 247 aa13.98□□□□□ -0.17
SCARB1-204ENST00000535005 RPTORQ8N122 1335 aa13.98□□□□□ -0.17
SCARB1-204ENST00000535005 RBBP6Q7Z6E9 1792 aaKnown RBP13.98□□□□□ -0.17
SCARB1-204ENST00000535005 SLC15A5A6NIM6 579 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 SREBF1P36956 1147 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 SP3Q02447 781 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 GRB14Q14449 540 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 RILPL1Q5EBL4 403 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 WDR78Q5VTH9 848 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 FOXD4L5Q5VV16 416 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-204ENST00000535005 MYSM1Q5VVJ2 828 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 FCHSD1Q86WN1 690 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 DNERQ8NFT8 737 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 FOXD4L4Q8WXT5 416 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-204ENST00000535005 TAAR1Q96RJ0 339 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 EHMT1Q9H9B1 1298 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 SPTLC3Q9NUV7 552 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 WBP1LQ9NX94 342 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 IVNS1ABPQ9Y6Y0 642 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 LOC102724159A0A0B4J2E5 919 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 GPR25O00155 361 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 USP11P51784 963 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 LACTBP83111 547 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-204ENST00000535005 PWP2Q15269 919 aaKnown RBP13.97□□□□□ -0.17
SCARB1-204ENST00000535005 ATL3Q6DD88 541 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 TBCKQ8TEA7 893 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 RMDN3Q96TC7 470 aa13.97□□□□□ -0.17
SCARB1-204ENST00000535005 EDIL3O43854 480 aa13.96□□□□□ -0.17
SCARB1-204ENST00000535005 CYP3A4P08684 503 aa13.96□□□□□ -0.17
SCARB1-204ENST00000535005 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.17
SCARB1-204ENST00000535005 DMTNQ08495 405 aa13.96□□□□□ -0.17
SCARB1-204ENST00000535005 MORN1Q5T089 497 aa13.96□□□□□ -0.17
SCARB1-204ENST00000535005 XRRA1Q6P2D8 792 aa13.96□□□□□ -0.17
SCARB1-204ENST00000535005 NSUN6Q8TEA1 469 aaKnown RBP13.96□□□□□ -0.17
SCARB1-204ENST00000535005 PGBD1Q96JS3 809 aa13.96□□□□□ -0.17
SCARB1-204ENST00000535005 GTPBP4Q9BZE4 634 aaKnown RBP13.96□□□□□ -0.17
SCARB1-204ENST00000535005 PXMP2Q9NR77 195 aa13.96□□□□□ -0.17
SCARB1-204ENST00000535005 ADD3Q9UEY8 706 aaKnown RBP13.96□□□□□ -0.17
SCARB1-204ENST00000535005 DIS3Q9Y2L1 958 aaKnown RBP13.96□□□□□ -0.17
SCARB1-204ENST00000535005 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.96□□□□□ -0.175e-9■■□□□ 11.6
SCARB1-204ENST00000535005 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms