RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 PRDM9Q9NQV7 894 aa10.47□□□□□ -0.73
CCDC90B-219ENST00000534753 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
CCDC90B-219ENST00000534753 ZSWIM5Q9P217 1185 aa10.47□□□□□ -0.73
CCDC90B-219ENST00000534753 MAP10Q9P2G4 905 aa10.47□□□□□ -0.73
CCDC90B-219ENST00000534753 DDX20Q9UHI6 824 aaKnown RBP10.47□□□□□ -0.73
CCDC90B-219ENST00000534753 OGDHLQ9ULD0 1010 aa10.47□□□□□ -0.73
CCDC90B-219ENST00000534753 CCPG1Q9ULG6 757 aa10.47□□□□□ -0.73
CCDC90B-219ENST00000534753 RAD50Q92878 1312 aa10.47□□□□□ -0.73
CCDC90B-219ENST00000534753 SGSM2O43147 1006 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 CYBAP13498 195 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 OAZ1P54368 228 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 NSMFQ6X4W1 530 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 UBE2Q1Q7Z7E8 422 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 ANKLE1Q8NAG6 615 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 PNMA1Q8ND90 353 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 CHST13Q8NET6 341 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 SENP6Q9GZR1 1112 aaPredicted RBP10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 UBA5Q9GZZ9 404 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 ACAD9Q9H845 621 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 VAT1LQ9HCJ6 419 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 FBXO40Q9UH90 709 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 ZHX1Q9UKY1 873 aaPredicted RBP10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 NR2E3Q9Y5X4 410 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 TNKSO95271 1327 aa10.46□□□□□ -0.73
CCDC90B-219ENST00000534753 ZNFX1Q9P2E3 1918 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 ZNF536O15090 1300 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 ATP2A1O14983 1001 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 SEPT4O43236 478 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 PDHBP11177 359 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 JUNDP17535 347 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 CNTN2Q02246 1040 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 USH1GQ495M9 461 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 CCDC178Q5BJE1 867 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 MUM1L1Q5H9M0 696 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 IFIT1BQ5T764 474 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 CYB5R4Q7L1T6 521 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 CHST3Q7LGC8 479 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 DGKHQ86XP1 1220 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 ENAHQ8N8S7 591 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 LENG1Q96BZ8 264 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 ZMYND8Q9ULU4 1186 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 TAF6LQ9Y6J9 622 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 PDE4DIPQ5VU43 2346 aa10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 MKI67P46013 3256 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-219ENST00000534753 LAMA4Q16363 1823 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 ZNF236Q9UL36 1845 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 ERICH2A1L162 156 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 PTPDC1A2A3K4 754 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 KBTBD13C9JR72 458 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 E7EWF7 191 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 IFIT3O14879 490 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 MSCO60682 206 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 PLA2G6O60733 806 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 ICAM1P05362 532 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 CYP21A2P08686 494 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 RARBP10826 455 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 SYN1P17600 705 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 CAPN2P17655 700 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 NOVP48745 357 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 ZNF543Q08ER8 600 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 NOL8Q76FK4 1167 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 ARRDC4Q8NCT1 418 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 FERMT2Q96AC1 680 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 ANO2Q9NQ90 1003 aa10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 A1CFQ9NQ94 594 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 DIS3Q9Y2L1 958 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 RBM8AQ9Y5S9 174 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 DDX49Q9Y6V7 483 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-219ENST00000534753 PLXNA1Q9UIW2 1896 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 PFASO15067 1338 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 DNAJC25-GNG10A0A024R161 153 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 SNAI1O95863 264 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 PGK1P00558 417 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 F12P00748 615 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 PARP1P09874 1014 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 CALML3P27482 149 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 TKFCQ3LXA3 575 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 BTNL9Q6UXG8 535 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 EEPD1Q7L9B9 569 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 CCDC144CPQ8IYA2 1237 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 NCOA7Q8NI08 942 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 PURBQ96QR8 312 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 ESYT1Q9BSJ8 1104 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 RANBP17Q9H2T7 1088 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 XPNPEP3Q9NQH7 507 aa10.43□□□□□ -0.74
CCDC90B-219ENST00000534753 NFIBO00712 420 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 IGHA2P01877 340 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 ZNF865P0CJ78 1059 aaPredicted RBP10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 AKR1A1P14550 325 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 ADCYAP1R1P41586 468 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 ACVR2BQ13705 512 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 BAATQ14032 418 aaPredicted RBP10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 LRRC26Q2I0M4 334 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 TMEM67Q5HYA8 995 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 GPATCH4Q5T3I0 446 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 CASC1Q6TDU7 716 aa10.42□□□□□ -0.74
CCDC90B-219ENST00000534753 STOX1Q6ZVD7 989 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms