RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 UPK3BL1B0FP48 263 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 UPK3BL2E5RIL1 263 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 PDPK1O15530 556 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 GJB6O95452 261 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 PGRP06401 933 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 SNRPNP63162 240 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 HNRNPUQ00839 825 aaKnown RBP eCLIP6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 PDE4BQ07343 736 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 RASGRF1Q13972 1273 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 DUOXA2Q1HG44 320 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 ZBTB37Q5TC79 503 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 UNC5AQ6ZN44 842 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 NLRC3Q7RTR2 1065 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 GPC2Q8N158 579 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 SLC9A7Q96T83 725 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 DNAJC7Q99615 494 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 R3HDMLQ9H3Y0 253 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 KANSL2Q9H9L4 492 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 TJP2Q9UDY2 1190 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 KIF1BO60333 1816 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 ACACBO00763 2458 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 SBNO2Q9Y2G9 1366 aa6.31□□□□□ -1.4
ECHDC1-223ENST00000534442 ZNF318Q5VUA4 2279 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 TNFRSF10CO14798 259 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 WFS1O76024 890 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 ARHGEF15O94989 841 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 ARSHQ5FYA8 562 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 C2CD5Q86YS7 1000 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 FANCD2OSQ96PS1 177 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 RUSC1Q9BVN2 902 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 PLVAPQ9BX97 442 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 FBRSQ9HAH7 460 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 KLHL3Q9UH77 587 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 DAPK1P53355 1430 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 ANKRD50Q9ULJ7 1429 aa6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 GCN1Q92616 2671 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-223ENST00000534442 NCOR2Q9Y618 2525 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 XIRP2A4UGR9 3374 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 FAM229AH3BQW9 127 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 FANCGO15287 622 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 DDAH1O94760 285 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 NEFMP07197 916 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 RFC4P35249 363 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 RAC1P63000 192 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 SLC9C1Q4G0N8 1177 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 MRM1Q6IN84 353 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 C6orf15Q6UXA7 325 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 DLK2Q6UY11 383 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 UBE2Q1Q7Z7E8 422 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 SMG8Q8ND04 991 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 RNF214Q8ND24 703 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 NEDD1Q8NHV4 660 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 DCAF11Q8TEB1 546 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 SUGCTQ9HAC7 445 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 GBA2Q9HCG7 927 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 FAM208BQ5VWN6 2430 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 BCORQ6W2J9 1755 aa6.29□□□□□ -1.4
ECHDC1-223ENST00000534442 ZNF609O15014 1411 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 MED19A0JLT2 244 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 ANKRD62A6NC57 917 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 POLRMTO00411 1230 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 ENPP3O14638 875 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 ADH5P11766 374 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 HSD3B2P26439 372 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 ITPK1Q13572 414 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 NBPF11Q86T75 865 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 ARHGEF25Q86VW2 580 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 RASAL3Q86YV0 1011 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 SH3TC2Q8TF17 1288 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 TMEM87BQ96K49 555 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 RNF208Q9H0X6 261 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 GSX1Q9H4S2 264 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 THEGQ9P2T0 379 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 PCDHB10Q9UN67 800 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 LTN1O94822 1766 aa6.28□□□□□ -1.4
ECHDC1-223ENST00000534442 ADGRF5Q8IZF2 1346 aa6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 USP9XQ93008 2570 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 ZFHX2Q9C0A1 2572 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 H0YIN7 160 aa6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 TIAF1O95411 115 aa6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 DRD2P14416 443 aa6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 MAGEA10P43363 369 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 MRPS5P82675 430 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 TTLL4Q14679 1199 aa6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 NKG7Q16617 165 aa6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 IGF2-ASQ6U949 168 aa6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 HID1Q8IV36 788 aa6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 MRPL41Q8IXM3 137 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-223ENST00000534442 SVOPQ8N4V2 548 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms