RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, human

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC17-215	ENST00000534417	RAD54L	Q92698	747 aa		11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	CUL5	Q93034	780 aa		11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	UBA5	Q9GZZ9	404 aa		11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	QTRT2	Q9H974	415 aa	Known RBP	11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	TMEM260	Q9NX78	707 aa		11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	LRWD1	Q9UFC0	647 aa		11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	LUC7L2	Q9Y383	392 aa	Known RBP	11.75	□□□□□ -0.53
TTC17-215	ENST00000534417		V9GYY5	206 aa	Predicted RBP	11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	SCN9A	Q15858	1988 aa		11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	KDM3A	Q9Y4C1	1321 aa		11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	ATRNL1	Q5VV63	1379 aa		11.75	□□□□□ -0.53
TTC17-215	ENST00000534417	TTC26	A0AVF1	554 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	MYMK	A6NI61	221 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	POTEB2	H3BUK9	544 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	SLC37A4	O43826	429 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	NDUFA10	O95299	355 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	FGFR1OP	O95684	399 aa	Known RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	ZSCAN20	P17040	1043 aa	Predicted RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	TEC	P42680	631 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	MMP14	P50281	582 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	CLCN6	P51797	869 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	ZBED6	P86452	979 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	DMTN	Q08495	405 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	STK4	Q13043	487 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	WHAMMP3	Q1A5X7	153 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	MIIP	Q5JXC2	388 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	STRIP1	Q5VSL9	837 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	ANKRD40	Q6AI12	368 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	TATDN1	Q6P1N9	297 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	SRGAP1	Q7Z6B7	1085 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	CCDC170	Q8IYT3	715 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	LRRC47	Q8N1G4	583 aa	Known RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	MSL3	Q8N5Y2	521 aa	Known RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	LARP4B	Q92615	738 aa	Known RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	GOLGA1	Q92805	767 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	CNOT6L	Q96LI5	555 aa	Known RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	NUP88	Q99567	741 aa	Predicted RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	TUBGCP2	Q9BSJ2	902 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	EDEM3	Q9BZQ6	932 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	HAUS4	Q9H6D7	363 aa		11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.74	□□□□□ -0.53
TTC17-215	ENST00000534417	RASSF10	A6NK89	507 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	PSMD14	O00487	310 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	TDP2	O95551	362 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	TUBB	P07437	444 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	CRK	P46108	304 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	USP11	P51784	963 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	CBX1	P83916	185 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	AMPD2	Q01433	879 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	AP3B2	Q13367	1082 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	PICALM	Q13492	652 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	KRT79	Q5XKE5	535 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	WDR59	Q6PJI9	974 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	COL23A1	Q86Y22	540 aa	Predicted RBP	11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	KCTD17	Q8N5Z5	321 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	MSANTD4	Q8NCY6	345 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	CPLX3	Q8WVH0	158 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	CRYGN	Q8WXF5	182 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	COA7	Q96BR5	231 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	NAPG	Q99747	312 aa	Predicted RBP	11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	DNAJC18	Q9H819	358 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	KANSL2	Q9H9L4	492 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	VAT1L	Q9HCJ6	419 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	MAPK8IP1	Q9UQF2	711 aa		11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	REXO2	Q9Y3B8	237 aa	Known RBP	11.73	□□□□□ -0.53
TTC17-215	ENST00000534417	CTAGE9	A4FU28	777 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	EIF3CL	B5ME19	914 aa	Known RBP	11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	RIMBP2	O15034	1052 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	TRIM37	O94972	964 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	TXK	P42681	527 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	KRT83	P78385	493 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	BRD3	Q15059	726 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	DACT2	Q5SW24	774 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	EHBP1	Q8NDI1	1231 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	GMCL1P1	Q8NEA9	526 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	ACRBP	Q8NEB7	543 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	HAS1	Q92839	578 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	DNAJC19	Q96DA6	116 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	GMCL1	Q96IK5	515 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	EIF3C	Q99613	913 aa	Known RBP	11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	UBXN6	Q9BZV1	441 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	NT5C3A	Q9H0P0	336 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	TMX4	Q9H1E5	349 aa	Predicted RBP	11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	SEMA6B	Q9H3T3	888 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	KCNMB3	Q9NPA1	279 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	GPCPD1	Q9NPB8	672 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	DDX25	Q9UHL0	483 aa	Known RBP	11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	SERPINA10	Q9UK55	444 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	MTMR7	Q9Y216	660 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	FHOD1	Q9Y613	1164 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	STK24	Q9Y6E0	443 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	SLX4	Q8IY92	1834 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	KIF13B	Q9NQT8	1826 aa		11.72	□□□□□ -0.53
TTC17-215	ENST00000534417	CCDC151	A5D8V7	595 aa		11.71	□□□□□ -0.53
TTC17-215	ENST00000534417	SPDYE4	A6NLX3	237 aa		11.71	□□□□□ -0.53
TTC17-215	ENST00000534417	TBX3	O15119	743 aa		11.71	□□□□□ -0.53

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