RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 TLK2Q86UE8 772 aa18.27■□□□□ 0.52
TSKU-204ENST00000533752 CMTR1Q8N1G2 835 aaKnown RBP18.27■□□□□ 0.52
TSKU-204ENST00000533752 KLHDC9Q8NEP7 349 aa18.27■□□□□ 0.52
TSKU-204ENST00000533752 CUL5Q93034 780 aa18.27■□□□□ 0.52
TSKU-204ENST00000533752 TAAR1Q96RJ0 339 aa18.27■□□□□ 0.52
TSKU-204ENST00000533752 AP5M1Q9H0R1 490 aa18.27■□□□□ 0.52
TSKU-204ENST00000533752 PXMP2Q9NR77 195 aa18.27■□□□□ 0.52
TSKU-204ENST00000533752 GNEQ9Y223 722 aaKnown RBP18.27■□□□□ 0.52
TSKU-204ENST00000533752 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.26■□□□□ 0.51
TSKU-204ENST00000533752 RBM47A0AV96 593 aaKnown RBP18.26■□□□□ 0.51
TSKU-204ENST00000533752 hCG_1984214I3L0E3 225 aa18.26■□□□□ 0.51
TSKU-204ENST00000533752 NKRFO15226 690 aaKnown RBP eCLIP18.26■□□□□ 0.51
TSKU-204ENST00000533752 ADCY6O43306 1168 aa18.26■□□□□ 0.51
TSKU-204ENST00000533752 SMPD1P17405 629 aa18.26■□□□□ 0.51
TSKU-204ENST00000533752 DUSP28Q4G0W2 176 aa18.26■□□□□ 0.51
TSKU-204ENST00000533752 TEX2Q8IWB9 1127 aa18.26■□□□□ 0.51
TSKU-204ENST00000533752 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
TSKU-204ENST00000533752 ZNF713Q8N859 430 aaPredicted RBP18.26■□□□□ 0.51
TSKU-204ENST00000533752 WDR11Q9BZH6 1224 aa18.26■□□□□ 0.51
TSKU-204ENST00000533752 RBM27Q9P2N5 1060 aaKnown RBP18.26■□□□□ 0.51
TSKU-204ENST00000533752 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
TSKU-204ENST00000533752 PIK3CDO00329 1044 aa18.25■□□□□ 0.51
TSKU-204ENST00000533752 ZEB2O60315 1214 aa18.25■□□□□ 0.51
TSKU-204ENST00000533752 EIF2AK2P19525 551 aaKnown RBP18.25■□□□□ 0.51
TSKU-204ENST00000533752 HOXA13P31271 388 aaPredicted RBP18.25■□□□□ 0.51
TSKU-204ENST00000533752 EVCP57679 992 aa18.25■□□□□ 0.51
TSKU-204ENST00000533752 TTLL4Q14679 1199 aa18.25■□□□□ 0.51
TSKU-204ENST00000533752 PPP1R18Q6NYC8 613 aa18.25■□□□□ 0.51
TSKU-204ENST00000533752 HEATR3Q7Z4Q2 680 aa18.25■□□□□ 0.51
TSKU-204ENST00000533752 PDGFCQ9NRA1 345 aa18.25■□□□□ 0.51
TSKU-204ENST00000533752 A0A1W2PQ45 241 aaPredicted RBP18.24■□□□□ 0.51
TSKU-204ENST00000533752 A0A1W2PQY0 241 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 H0YGN5 161 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 EIF3JO75822 258 aaKnown RBP18.24■□□□□ 0.51
TSKU-204ENST00000533752 NR3C2P08235 984 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 CDC27P30260 824 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 ACLYP53396 1101 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 FUT2Q10981 343 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 SNX17Q15036 470 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 FSCN1Q16658 493 aaKnown RBP18.24■□□□□ 0.51
TSKU-204ENST00000533752 LRRC26Q2I0M4 334 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 GNASQ5JWF2 1037 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 C1orf53Q5VUE5 145 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 CCSAPQ6IQ19 270 aaPredicted RBP18.24■□□□□ 0.51
TSKU-204ENST00000533752 C7orf61Q8IZ16 206 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 SMARCC2Q8TAQ2 1214 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 PDCD2LQ9BRP1 358 aa18.24■□□□□ 0.51
TSKU-204ENST00000533752 UPF3BQ9BZI7 483 aaKnown RBP18.24■□□□□ 0.51
TSKU-204ENST00000533752 FRMPD4Q14CM0 1322 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 ALPK3Q96L96 1907 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 MYADML2A6NDP7 307 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 CCND2P30279 289 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 ATN1P54259 1190 aaPredicted RBP18.23■□□□□ 0.51
TSKU-204ENST00000533752 KCNA10Q16322 511 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 BRDTQ58F21 947 aaPredicted RBP18.23■□□□□ 0.51
TSKU-204ENST00000533752 SLC39A5Q6ZMH5 540 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 FCHSD1Q86WN1 690 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 GLT1D1Q96MS3 346 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 PSTPIP2Q9H939 334 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 FAM217BQ9NTX9 383 aaPredicted RBP18.23■□□□□ 0.51
TSKU-204ENST00000533752 PDRG1Q9NUG6 133 aa18.23■□□□□ 0.51
TSKU-204ENST00000533752 DYNC1LI2O43237 492 aaPredicted RBP18.22■□□□□ 0.51
TSKU-204ENST00000533752 STAM2O75886 525 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 CABYRO75952 493 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 CPT1AP50416 773 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 RTP1P59025 263 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 TOB2Q14106 344 aaPredicted RBP18.22■□□□□ 0.51
TSKU-204ENST00000533752 PGM5Q15124 567 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 GLT8D2Q9H1C3 349 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 STARD7Q9NQZ5 370 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 V9GY48 417 aaPredicted RBP18.22■□□□□ 0.51
TSKU-204ENST00000533752 ELP1O95163 1332 aa18.22■□□□□ 0.51
TSKU-204ENST00000533752 hCG_1642624A0A1W2PR95 340 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 CTAGE5O15320 804 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 ASGR1P07306 291 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 TXNP10599 105 aaKnown RBP18.21■□□□□ 0.51
TSKU-204ENST00000533752 PDIA3P30101 505 aaKnown RBP18.21■□□□□ 0.51
TSKU-204ENST00000533752 ADD1P35611 737 aaKnown RBP18.21■□□□□ 0.51
TSKU-204ENST00000533752 NAPAP54920 295 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 AKAP17AQ02040 695 aaKnown RBP18.21■□□□□ 0.51
TSKU-204ENST00000533752 WWC2Q6AWC2 1192 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 XRRA1Q6P2D8 792 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 KCNV1Q6PIU1 500 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 SEPT14Q6ZU15 432 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 VSIG10LQ86VR7 867 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 OR6J1Q8NGC5 347 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 GPKOWQ92917 476 aaPredicted RBP eCLIP18.21■□□□□ 0.51
TSKU-204ENST00000533752 ZNF274Q96GC6 653 aaPredicted RBP18.21■□□□□ 0.51
TSKU-204ENST00000533752 MROH7Q68CQ1 1323 aa18.21■□□□□ 0.51
TSKU-204ENST00000533752 MEIS2O14770 477 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 MYCLP12524 364 aaPredicted RBP18.2■□□□□ 0.5
TSKU-204ENST00000533752 ANKRD1Q15327 319 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 GNPTABQ3T906 1256 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 CCDC62Q6P9F0 684 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 CPLX2Q6PUV4 134 aaKnown RBP18.2■□□□□ 0.5
TSKU-204ENST00000533752 USP17L6PQ6QN14 398 aa18.2■□□□□ 0.5
TSKU-204ENST00000533752 CCDC12Q8WUD4 166 aaPredicted RBP18.2■□□□□ 0.5
TSKU-204ENST00000533752 RNF26Q9BY78 433 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms