RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 FXR1P51114 621 aaKnown RBP eCLIP7.5□□□□□ -1.21
SOX6-216ENST00000533658 RBM5P52756 815 aaKnown RBP eCLIP7.5□□□□□ -1.21
SOX6-216ENST00000533658 SREBF2Q12772 1141 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 TRIP4Q15650 581 aaPredicted RBP7.5□□□□□ -1.21
SOX6-216ENST00000533658 CFAP100Q494V2 611 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 LRRC24Q50LG9 513 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 TAF7LQ5H9L4 462 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 LILRA6Q6PI73 481 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 LDHAL6AQ6ZMR3 332 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 ZBED3Q96IU2 234 aaPredicted RBP7.5□□□□□ -1.21
SOX6-216ENST00000533658 PRMT6Q96LA8 375 aaPredicted RBP7.5□□□□□ -1.21
SOX6-216ENST00000533658 ANKRD2Q9GZV1 360 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 VEZTQ9HBM0 779 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
SOX6-216ENST00000533658 CNNM1Q9NRU3 951 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 C9orf78Q9NZ63 289 aaPredicted RBP7.5□□□□□ -1.21
SOX6-216ENST00000533658 SEPT3Q9UH03 358 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
SOX6-216ENST00000533658 TRIOBPQ9H2D6 2365 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 CDC27P30260 824 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 CACNB3P54284 484 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 HYAL2Q12891 473 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 CHAF1AQ13111 956 aaPredicted RBP7.49□□□□□ -1.21
SOX6-216ENST00000533658 DLGAP5Q15398 846 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 CCDC57Q2TAC2 916 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 NBPF12Q5TAG4 269 aaPredicted RBP7.49□□□□□ -1.21
SOX6-216ENST00000533658 OTOP1Q7RTM1 612 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 OR13H1Q8NG92 308 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 LACRTQ9GZZ8 138 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 DEFB129Q9H1M3 183 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 BICC1Q9H694 974 aaKnown RBP7.49□□□□□ -1.21
SOX6-216ENST00000533658 KIAA0100Q14667 2235 aaKnown RBP7.49□□□□□ -1.21
SOX6-216ENST00000533658 CEP290O15078 2479 aa7.49□□□□□ -1.21
SOX6-216ENST00000533658 PSME4Q14997 1843 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 B8ZZF3 427 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 GAS2O43903 313 aaKnown RBP7.48□□□□□ -1.21
SOX6-216ENST00000533658 CDC25BP30305 580 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 BUD31P41223 144 aaPredicted RBP7.48□□□□□ -1.21
SOX6-216ENST00000533658 AAMPQ13685 434 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 FAM26DQ5JW98 314 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 ALKBH2Q6NS38 261 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 FAM117BQ6P1L5 589 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 ANKRD44Q8N8A2 993 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 HELQQ8TDG4 1101 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 SSH1Q8WYL5 1049 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 SRCIN1Q9C0H9 1055 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 RNF208Q9H0X6 261 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 TDRD3Q9H7E2 651 aaKnown RBP7.48□□□□□ -1.21
SOX6-216ENST00000533658 ABI2Q9NYB9 513 aaPredicted RBP7.48□□□□□ -1.21
SOX6-216ENST00000533658 TRIM17Q9Y577 477 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 MYH3P11055 1940 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 ZNF521Q96K83 1311 aa7.48□□□□□ -1.21
SOX6-216ENST00000533658 COL6A3P12111 3177 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 TCP10L2B9ZVM9 353 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 IGF2BP3O00425 579 aaKnown RBP eCLIP7.47□□□□□ -1.21
SOX6-216ENST00000533658 ZBTB39O15060 712 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.21
SOX6-216ENST00000533658 IL1R1P14778 569 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 NF2P35240 595 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 CAP1Q01518 475 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 RASA3Q14644 834 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 MFSD14BQ5SR56 506 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 PDE12Q6L8Q7 609 aaKnown RBP7.47□□□□□ -1.21
SOX6-216ENST00000533658 FDX2Q6P4F2 183 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 ARMC9Q7Z3E5 817 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 ZNF438Q7Z4V0 828 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 ZNF804AQ7Z570 1209 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 FAM84BQ96KN1 310 aaPredicted RBP7.47□□□□□ -1.21
SOX6-216ENST00000533658 CHMP4AQ9BY43 222 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 TMEM39BQ9GZU3 492 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 TTF2Q9UNY4 1162 aaKnown RBP7.47□□□□□ -1.21
SOX6-216ENST00000533658 MYO3BQ8WXR4 1341 aa7.47□□□□□ -1.21
SOX6-216ENST00000533658 A0A1B0GUL6 1792 aa7.46□□□□□ -1.21
SOX6-216ENST00000533658 BIN1O00499 593 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 EN2P19622 333 aaPredicted RBP7.46□□□□□ -1.22
SOX6-216ENST00000533658 ATP11AP98196 1134 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 SGO2Q562F6 1265 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 CEP135Q66GS9 1140 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 INTS3Q68E01 1043 aaKnown RBP7.46□□□□□ -1.22
SOX6-216ENST00000533658 APOBEC3FQ8IUX4 373 aaKnown RBP7.46□□□□□ -1.22
SOX6-216ENST00000533658 KSR1Q8IVT5 923 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 GTF3C2Q8WUA4 911 aaPredicted RBP7.46□□□□□ -1.22
SOX6-216ENST00000533658 EDEM1Q92611 657 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 ARMC5Q96C12 935 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 SIL1Q9H173 461 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 ELP3Q9H9T3 547 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 ZNF70Q9UC06 446 aaPredicted RBP7.46□□□□□ -1.22
SOX6-216ENST00000533658 TNNQ9UQP3 1299 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 RIPOR2Q9Y4F9 1068 aa7.46□□□□□ -1.22
SOX6-216ENST00000533658 COL1A1P02452 1464 aaPredicted RBP7.46□□□□□ -1.22
SOX6-216ENST00000533658 RBBP6Q7Z6E9 1792 aaKnown RBP7.46□□□□□ -1.22
SOX6-216ENST00000533658 MANSC4A6NHS7 340 aaPredicted RBP7.45□□□□□ -1.22
SOX6-216ENST00000533658 CYP26A1O43174 497 aa7.45□□□□□ -1.22
SOX6-216ENST00000533658 USP2O75604 605 aaPredicted RBP7.45□□□□□ -1.22
SOX6-216ENST00000533658 ALDH1L1O75891 902 aa7.45□□□□□ -1.22
SOX6-216ENST00000533658 ZBTB48P10074 688 aaPredicted RBP7.45□□□□□ -1.22
SOX6-216ENST00000533658 HIBADHP31937 336 aaKnown RBP7.45□□□□□ -1.22
SOX6-216ENST00000533658 DNM1Q05193 864 aaKnown RBP7.45□□□□□ -1.22
SOX6-216ENST00000533658 CRHR2Q13324 411 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms