RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 hCG_1984214I3L0E3 225 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 ZBTB43O43298 467 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 EIF3JO75822 258 aaKnown RBP11.38□□□□□ -0.59
NUP98-220ENST00000533346 CABYRO75952 493 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 PLEKHA8P1O95397 391 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 PGK1P00558 417 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 POLR2MP0CAP2 368 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 CDK7P50613 346 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 ACLYP53396 1101 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 STXBP2Q15833 593 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 CCDC62Q6P9F0 684 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 RUFY3Q7L099 469 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 VSIG10LQ86VR7 867 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 ZNF713Q8N859 430 aaPredicted RBP11.38□□□□□ -0.59
NUP98-220ENST00000533346 SCFD2Q8WU76 684 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 JAKMIP1Q96N16 626 aaKnown RBP11.38□□□□□ -0.59
NUP98-220ENST00000533346 RMDN3Q96TC7 470 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 MYL10Q9BUA6 226 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 LRRC2Q9BYS8 371 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 PXMP2Q9NR77 195 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
NUP98-220ENST00000533346 LTBP2Q14767 1821 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 MYH7BA7E2Y1 1941 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 CCDC196A0A1B0GTZ2 297 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 A0A1W2PQ45 241 aaPredicted RBP11.37□□□□□ -0.59
NUP98-220ENST00000533346 A0A1W2PQY0 241 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 MEIS2O14770 477 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 STAM2O75886 525 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 CFBP00751 764 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 NR3C2P08235 984 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 PDE4DQ08499 809 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 KCNA10Q16322 511 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 KCNV1Q6PIU1 500 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 Q6ZUG5 572 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 ANKRD33Q7Z3H0 272 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 HOMER1Q86YM7 354 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 FBXO16Q8IX29 292 aaPredicted RBP11.37□□□□□ -0.59
NUP98-220ENST00000533346 SLC43A3Q8NBI5 491 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 GDF15Q99988 308 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 PDCD2LQ9BRP1 358 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
NUP98-220ENST00000533346 SEC63Q9UGP8 760 aaKnown RBP11.37□□□□□ -0.59
NUP98-220ENST00000533346 CNTNAP5Q8WYK1 1306 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 SCN10AQ9Y5Y9 1956 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 MYADML2A6NDP7 307 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 A6NJR5 290 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 ZEB2O60315 1214 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 ASGR1P07306 291 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 C6orf222P0C671 652 aaPredicted RBP11.36□□□□□ -0.59
NUP98-220ENST00000533346 TGFB3P10600 412 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 RXRAP19793 462 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 TTLL4Q14679 1199 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 PGM5Q15124 567 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 RTN1Q16799 776 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 GNASQ5JWF2 1037 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 ARHGEF16Q5VV41 709 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 PPP1R18Q6NYC8 613 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 XRRA1Q6P2D8 792 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 TLK2Q86UE8 772 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 MICU3Q86XE3 530 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 EMID1Q96A84 441 aaPredicted RBP11.36□□□□□ -0.59
NUP98-220ENST00000533346 TCEANC2Q96MN5 208 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 GLT1D1Q96MS3 346 aa11.36□□□□□ -0.59
NUP98-220ENST00000533346 RBM27Q9P2N5 1060 aaKnown RBP11.36□□□□□ -0.59
NUP98-220ENST00000533346 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 KLF18A0A0U1RQI7 1052 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 DYNC1LI2O43237 492 aaPredicted RBP11.35□□□□□ -0.59
NUP98-220ENST00000533346 KPNA6O60684 536 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 CASTP20810 708 aaKnown RBP11.35□□□□□ -0.59
NUP98-220ENST00000533346 CDC27P30260 824 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 ICAM3P32942 547 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 CPT1AP50416 773 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 RTP1P59025 263 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 NTRK3Q16288 839 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
NUP98-220ENST00000533346 EEPD1Q7L9B9 569 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 BRF1Q92994 677 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 LENG1Q96BZ8 264 aaPredicted RBP11.35□□□□□ -0.59
NUP98-220ENST00000533346 ZNF274Q96GC6 653 aaPredicted RBP11.35□□□□□ -0.59
NUP98-220ENST00000533346 AP5M1Q9H0R1 490 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 STARD7Q9NQZ5 370 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 DDX41Q9UJV9 622 aaKnown RBP11.35□□□□□ -0.59
NUP98-220ENST00000533346 CYP46A1Q9Y6A2 500 aa11.35□□□□□ -0.59
NUP98-220ENST00000533346 DDX49Q9Y6V7 483 aaKnown RBP11.35□□□□□ -0.59
NUP98-220ENST00000533346 GOLGA8AA7E2F4 631 aa11.34□□□□□ -0.59
NUP98-220ENST00000533346 GOLGA8BA8MQT2 603 aa11.34□□□□□ -0.59
NUP98-220ENST00000533346 ARVCFO00192 962 aa11.34□□□□□ -0.59
NUP98-220ENST00000533346 PRPF3O43395 683 aaKnown RBP11.34□□□□□ -0.59
NUP98-220ENST00000533346 RGS20O76081 388 aa11.34□□□□□ -0.59
NUP98-220ENST00000533346 TXNP10599 105 aaKnown RBP11.34□□□□□ -0.59
NUP98-220ENST00000533346 PDIA3P30101 505 aaKnown RBP11.34□□□□□ -0.59
NUP98-220ENST00000533346 METAP2P50579 478 aaKnown RBP eCLIP11.34□□□□□ -0.59
NUP98-220ENST00000533346 TOB2Q14106 344 aaPredicted RBP11.34□□□□□ -0.59
NUP98-220ENST00000533346 TMEM63BQ5T3F8 832 aa11.34□□□□□ -0.59
NUP98-220ENST00000533346 C7orf61Q8IZ16 206 aa11.34□□□□□ -0.59
NUP98-220ENST00000533346 FAM177A1Q8N128 213 aaPredicted RBP11.34□□□□□ -0.59
NUP98-220ENST00000533346 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
NUP98-220ENST00000533346 GLT8D2Q9H1C3 349 aa11.34□□□□□ -0.59
NUP98-220ENST00000533346 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
NUP98-220ENST00000533346 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms