RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	ERVK13-1	Q9NX77	482 aa		4.94	□□□□□ -1.62
LMO7-223	ENST00000533299	ADCY3	O60266	1144 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	THBD	P07204	575 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	FAM153B	P0C7A2	387 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	L1CAM	P32004	1257 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	RTP1	P59025	263 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	EFEMP1	Q12805	493 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	KCNAB2	Q13303	367 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	SNX17	Q15036	470 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	MYLIP	Q8WY64	445 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	APPBP2	Q92624	585 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	KCNN1	Q92952	543 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	MMP19	Q99542	508 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	TAF6L	Q9Y6J9	622 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	FADS2P1	A8MWK0	482 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	MYO1B	O43795	1136 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	PLS3	P13797	630 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	NAT1	P18440	290 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	GRIA2	P42262	883 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	LAPTM5	Q13571	262 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	ZPBP2	Q6X784	338 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	PPIL6	Q8IXY8	311 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	TMEM145	Q8NBT3	493 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	DCAF4	Q8WV16	495 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	DIO2	Q92813	273 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	HHIPL1	Q96JK4	782 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	GPRC5C	Q9NQ84	441 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299	PTCH2	Q9Y6C5	1203 aa		4.93	□□□□□ -1.62
LMO7-223	ENST00000533299		A0A1W2PQJ5	194 aa		4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	DLX3	O60479	287 aa		4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	NPHS1	O60500	1241 aa		4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	HPX	P02790	462 aa		4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	CAPNS1	P04632	268 aa		4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	LTBR	P36941	435 aa		4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	GTF2A2	P52657	109 aa		4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	RNPC3	Q96LT9	517 aa	Known RBP	4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	CLEC1B	Q9P126	229 aa		4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	MRPS23	Q9Y3D9	190 aa	Known RBP	4.92	□□□□□ -1.62
LMO7-223	ENST00000533299	NRDC	O43847	1150 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	USP2	O75604	605 aa	Predicted RBP	4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	INSRR	P14616	1297 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	ARL4A	P40617	200 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	CORO7	P57737	925 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	GABRE	P78334	506 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	SF1	Q15637	639 aa	Known RBP	4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	FAM209A	Q5JX71	171 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	SLC35F1	Q5T1Q4	408 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	USP53	Q70EK8	1073 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	NPLOC4	Q8TAT6	608 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	ABHD4	Q8TB40	342 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	FRS2	Q8WU20	508 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	OSBP2	Q969R2	916 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	ZFYVE21	Q9BQ24	234 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	G6PC3	Q9BUM1	346 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	TMEM260	Q9NX78	707 aa		4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	MRPL42	Q9Y6G3	142 aa	Known RBP	4.91	□□□□□ -1.62
LMO7-223	ENST00000533299	EFCAB14	O75071	495 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	CDC45	O75419	566 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	TCEA2	Q15560	299 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	TESK1	Q15569	626 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	GIMAP6	Q6P9H5	292 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	SLCO6A1	Q86UG4	719 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	CPNE8	Q86YQ8	564 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	NLGN2	Q8NFZ4	835 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	PTPRN2	Q92932	1015 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	XYLT2	Q9H1B5	865 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	SRRD	Q9UH36	339 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	GPR160	Q9UJ42	338 aa		4.9	□□□□□ -1.62
LMO7-223	ENST00000533299	AQP7	O14520	342 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	RPL11	P62913	178 aa	Known RBP	4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	PRSS53	Q2L4Q9	553 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	HSF5	Q4G112	596 aa	Predicted RBP	4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	TCERG1L	Q5VWI1	586 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	CABP7	Q86V35	215 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	JAZF1	Q86VZ6	243 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	KREMEN2	Q8NCW0	462 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	TMEM52	Q8NDY8	209 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	KISS1R	Q969F8	398 aa	Predicted RBP	4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	EXOC2	Q96KP1	924 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	GPR27	Q9NS67	375 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	FANCL	Q9NW38	375 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	TBX22	Q9Y458	520 aa		4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.9	□□□□□ -1.63
LMO7-223	ENST00000533299	SHROOM4	Q9ULL8	1493 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	ENPP3	O14638	875 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	HSD3B2	P26439	372 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	SDE2	Q6IQ49	451 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	C16orf86	Q6ZW13	317 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	TMEM151B	Q8IW70	566 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	IFNL3	Q8IZI9	196 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	NUP43	Q8NFH3	380 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	USP33	Q8TEY7	942 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	C1orf159	Q96HA4	380 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	CHAMP1	Q96JM3	812 aa		4.89	□□□□□ -1.63
LMO7-223	ENST00000533299	JMJD8	Q96S16	334 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms