RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MBD4O95243 580 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 TIGD5Q53EQ6 642 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 FBXO22Q8NEZ5 403 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 CAGE1Q8TC20 777 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 MRPL38Q96DV4 380 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 RNF146Q9NTX7 359 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 CLIP2Q9UDT6 1046 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
TRAPPC4-213ENST00000533149 RAD50Q92878 1312 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 ABHD14A-ACY1A0A1B0GW23 586 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 GOLIM4O00461 696 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 CHMLP26374 656 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 TMEM63BQ5T3F8 832 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 CNKSR3Q6P9H4 555 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 CTR9Q6PD62 1173 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 TMCO2Q7Z6W1 182 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 PRSS33Q8NF86 280 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 MORC4Q8TE76 937 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 PABPC5Q96DU9 382 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 POP1Q99575 1024 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 WDR11Q9BZH6 1224 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
TRAPPC4-213ENST00000533149 ZNF318Q5VUA4 2279 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 TANC1Q9C0D5 1861 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 GFRA3O60609 400 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 IRS1P35568 1242 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 DEFB103AP81534 67 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 HERC4Q5GLZ8 1057 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 BMP8AQ7Z5Y6 402 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 GMCL1P1Q8NEA9 526 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 ANKS1AQ92625 1134 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 MKL1Q969V6 931 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 INSL6Q9Y581 213 aa13.31□□□□□ -0.28
TRAPPC4-213ENST00000533149 NCK2O43639 380 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 BMP3P12645 472 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 SELPP16109 830 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 RASA1P20936 1047 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 ADD2P35612 726 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 STAT2P52630 851 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 IKBKEQ14164 716 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 PTGISQ16647 500 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 BANK1Q8NDB2 785 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 OR6J1Q8NGC5 347 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 CYP39A1Q9NYL5 469 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 ADD3Q9UEY8 706 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 SLC4A4Q9Y6R1 1079 aa13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 DDX49Q9Y6V7 483 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 BAZ2AQ9UIF9 1905 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-213ENST00000533149 SIP14410 1827 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 LOC102724159A0A0B4J2E5 919 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 NKRFO15226 690 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 ALAS1P13196 640 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 MFAP1P55081 439 aaKnown RBP13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 PWP2Q15269 919 aaKnown RBP13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 FAM160B2Q86V87 743 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 EDAQ92838 391 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 MUTYHQ9UIF7 546 aa13.29□□□□□ -0.28
TRAPPC4-213ENST00000533149 PTPRSQ13332 1948 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 GREB1LQ9C091 1923 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 TMEM232C9JQI7 657 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 HIP1O00291 1037 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 EIF5BO60841 1220 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 TTLL1O95922 423 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 CXCL10P02778 98 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 IER5LQ5T953 404 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 SLFN13Q68D06 897 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 SUGP1Q8IWZ8 645 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 LRRC47Q8N1G4 583 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 KBTBD3Q8NAB2 608 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 PBXIP1Q96AQ6 731 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 C17orf80Q9BSJ5 609 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 ESYT1Q9BSJ8 1104 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 DIAPH3Q9NSV4 1193 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 SCN10AQ9Y5Y9 1956 aa13.28□□□□□ -0.28
TRAPPC4-213ENST00000533149 TET1Q8NFU7 2136 aa13.27□□□□□ -0.28
TRAPPC4-213ENST00000533149 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 A6NJR5 290 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 TCF15Q12870 199 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 GPNMBQ14956 572 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 UBE3CQ15386 1083 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 SMAD2Q15796 467 aaKnown RBP13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 SBK1Q52WX2 424 aa13.27□□□□□ -0.29
TRAPPC4-213ENST00000533149 TCEAL5Q5H9L2 206 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms