RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SMPD1P17405 629 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 GNAQP50148 359 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 HSD17B4P51659 736 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 ANKRD1Q15327 319 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 DUSP28Q4G0W2 176 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 GNASQ5JWF2 1037 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 APOA5Q6Q788 366 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 FBXO16Q8IX29 292 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 NSUN6Q8TEA1 469 aaKnown RBP14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 TBC1D5Q92609 795 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 FERMT2Q96AC1 680 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 TOX2Q96NM4 488 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 PIGSQ96S52 555 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 PDGFCQ9NRA1 345 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 BRPF3Q9ULD4 1205 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 ZMYND8Q9ULU4 1186 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 PCDHA1Q9Y5I3 950 aa14.97□□□□□ -0.01
TRAPPC4-212ENST00000533058 MYADML2A6NDP7 307 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 OPLAHO14841 1288 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 NKRFO15226 690 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 CABYRO75952 493 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 PDE4DQ08499 809 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 TOB2Q14106 344 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 RABEP1Q15276 862 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 EEPD1Q7L9B9 569 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 ANKRD33Q7Z3H0 272 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 TLK2Q86UE8 772 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 IL17RAQ96F46 866 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 GLT1D1Q96MS3 346 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 SEZ6LQ9BYH1 1024 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 STARD7Q9NQZ5 370 aa14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 DDX49Q9Y6V7 483 aaKnown RBP14.96□□□□□ -0.01
TRAPPC4-212ENST00000533058 MCM3APO60318 1980 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 SLC34A2O95436 690 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 ASGR1P07306 291 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 SYN1P17600 705 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 MAGEA10P43363 369 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 METAP2P50579 478 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 AK2P54819 239 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 RTN1Q16799 776 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 TRIM60Q495X7 471 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 FANCBQ8NB91 859 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 SCFD2Q8WU76 684 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 TAAR1Q96RJ0 339 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 WDR11Q9BZH6 1224 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 AP5M1Q9H0R1 490 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 COL20A1Q9P218 1284 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 PRKAG2Q9UGJ0 569 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 ATP11BQ9Y2G3 1177 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 LCTP09848 1927 aa14.95□□□□□ -0.02
TRAPPC4-212ENST00000533058 DYNC1LI2O43237 492 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 ZEB2O60315 1214 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 CDK7P50613 346 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 TLE2Q04725 743 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 STK3Q13188 491 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 FSCN1Q16658 493 aaKnown RBP14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 HOMER1Q86YM7 354 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 FBXL16Q8N461 479 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 PIBF1Q8WXW3 757 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 RMDN3Q96TC7 470 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 KIF2CQ99661 725 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 AGXT2Q9BYV1 514 aa14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 RBM28Q9NW13 759 aaKnown RBP14.94□□□□□ -0.02
TRAPPC4-212ENST00000533058 TRIOBPQ9H2D6 2365 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 MROH7Q68CQ1 1323 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 CCDC196A0A1B0GTZ2 297 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 ST18O60284 1047 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 CFBP00751 764 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 FXR1P51114 621 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 RCAN1P53805 252 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 STXBP2Q15833 593 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 CCDC82Q8N4S0 544 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 SLC43A3Q8NBI5 491 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 RRP36Q96EU6 259 aaKnown RBP14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 ALDH8A1Q9H2A2 487 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 PDLIM7Q9NR12 457 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
TRAPPC4-212ENST00000533058 LRRC37A2A6NM11 1700 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 A0A0U1RQG5 324 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 GCOM1H8Y6P7 765 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 ARVCFO00192 962 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 EIF3JO75822 258 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 PLEKHA8P1O95397 391 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 NR3C2P08235 984 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 CLTBP09497 229 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 POLR2MP0CAP2 368 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 CCT2P78371 535 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 TTLL4Q14679 1199 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 PPP2R5BQ15173 497 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 TMEM63BQ5T3F8 832 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 ARHGEF16Q5VV41 709 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 CCDC62Q6P9F0 684 aa14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 CMTR1Q8N1G2 835 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 SRBD1Q8N5C6 995 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 RANBP2P49792 3224 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-212ENST00000533058 DNAH12Q6ZR08 3092 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms