RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ZBTB5O15062 677 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 ZEB2O60315 1214 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 HSD17B4P51659 736 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 PURAQ00577 322 aaKnown RBP22.04■■□□□ 1.12
SSH3-209ENST00000532600 WTAPQ15007 396 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 FAM109BQ6ICB4 259 aaPredicted RBP22.04■■□□□ 1.12
SSH3-209ENST00000532600 RALYLQ86SE5 291 aaKnown RBP22.04■■□□□ 1.12
SSH3-209ENST00000532600 OR6J1Q8NGC5 347 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 SCFD2Q8WU76 684 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 PIGSQ96S52 555 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 AMNQ9BXJ7 453 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 PPP1R12CQ9BZL4 782 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 TRPV6Q9H1D0 765 aa22.04■■□□□ 1.12
SSH3-209ENST00000532600 SCN10AQ9Y5Y9 1956 aa22.03■■□□□ 1.12
SSH3-209ENST00000532600 B4GALT4O60513 344 aa22.03■■□□□ 1.12
SSH3-209ENST00000532600 PPP2R5BQ15173 497 aa22.03■■□□□ 1.12
SSH3-209ENST00000532600 TMEM67Q5HYA8 995 aa22.03■■□□□ 1.12
SSH3-209ENST00000532600 MCF2L2Q86YR7 1114 aa22.03■■□□□ 1.12
SSH3-209ENST00000532600 NSUN6Q8TEA1 469 aaKnown RBP22.03■■□□□ 1.12
SSH3-209ENST00000532600 RMDN3Q96TC7 470 aa22.03■■□□□ 1.12
SSH3-209ENST00000532600 LY9Q9HBG7 655 aa22.03■■□□□ 1.12
SSH3-209ENST00000532600 A6NJR5 290 aa22.02■■□□□ 1.12
SSH3-209ENST00000532600 SLC27A2O14975 620 aa22.02■■□□□ 1.12
SSH3-209ENST00000532600 CFBP00751 764 aa22.02■■□□□ 1.12
SSH3-209ENST00000532600 TXNP10599 105 aaKnown RBP22.02■■□□□ 1.12
SSH3-209ENST00000532600 CSF2RAP15509 400 aa22.02■■□□□ 1.12
SSH3-209ENST00000532600 CYP2C18P33260 490 aa22.02■■□□□ 1.12
SSH3-209ENST00000532600 PPP1R13LQ8WUF5 828 aa22.02■■□□□ 1.12
SSH3-209ENST00000532600 RNPC3Q96LT9 517 aaKnown RBP22.02■■□□□ 1.12
SSH3-209ENST00000532600 GUCD1Q96NT3 240 aa22.02■■□□□ 1.12
SSH3-209ENST00000532600 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.02■■□□□ 1.12
SSH3-209ENST00000532600 PCDHA1Q9Y5I3 950 aa22.02■■□□□ 1.12
SSH3-209ENST00000532600 NKRFO15226 690 aaKnown RBP eCLIP22.01■■□□□ 1.11
SSH3-209ENST00000532600 TLR3O15455 904 aaKnown RBP22.01■■□□□ 1.11
SSH3-209ENST00000532600 MYL3P08590 195 aa22.01■■□□□ 1.11
SSH3-209ENST00000532600 EIF2AK2P19525 551 aaKnown RBP22.01■■□□□ 1.11
SSH3-209ENST00000532600 CPT1AP50416 773 aa22.01■■□□□ 1.11
SSH3-209ENST00000532600 NECTIN1Q15223 517 aa22.01■■□□□ 1.11
SSH3-209ENST00000532600 HOMER1Q86YM7 354 aa22.01■■□□□ 1.11
SSH3-209ENST00000532600 VWCEQ96DN2 955 aa22.01■■□□□ 1.11
SSH3-209ENST00000532600 MPHOSPH6Q99547 160 aaKnown RBP22.01■■□□□ 1.11
SSH3-209ENST00000532600 MYL10Q9BUA6 226 aa22.01■■□□□ 1.11
SSH3-209ENST00000532600 ALDH8A1Q9H2A2 487 aaPredicted RBP22.01■■□□□ 1.11
SSH3-209ENST00000532600 PXMP2Q9NR77 195 aa22.01■■□□□ 1.11
SSH3-209ENST00000532600 ERICH2A1L162 156 aa22■■□□□ 1.11
SSH3-209ENST00000532600 HOXA13P31271 388 aaPredicted RBP22■■□□□ 1.11
SSH3-209ENST00000532600 SMAD3P84022 425 aaKnown RBP22■■□□□ 1.11
SSH3-209ENST00000532600 ARHGAP1Q07960 439 aa22■■□□□ 1.11
SSH3-209ENST00000532600 TTLL4Q14679 1199 aa22■■□□□ 1.11
SSH3-209ENST00000532600 LY6KQ17RY6 165 aa22■■□□□ 1.11
SSH3-209ENST00000532600 TMEM240Q5SV17 173 aa22■■□□□ 1.11
SSH3-209ENST00000532600 SEPT14Q6ZU15 432 aa22■■□□□ 1.11
SSH3-209ENST00000532600 FAM161BQ96MY7 647 aa22■■□□□ 1.11
SSH3-209ENST00000532600 IWS1Q96ST2 819 aa22■■□□□ 1.11
SSH3-209ENST00000532600 NOC4LQ9BVI4 516 aaKnown RBP22■■□□□ 1.11
SSH3-209ENST00000532600 POLR3EQ9NVU0 708 aa22■■□□□ 1.11
SSH3-209ENST00000532600 B4DLN1 442 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 PRC1O43663 620 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 RGS20O76081 388 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 NR3C2P08235 984 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 ACRP10323 421 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 MRPL12P52815 198 aaKnown RBP21.99■■□□□ 1.11
SSH3-209ENST00000532600 SART3Q15020 963 aaKnown RBP21.99■■□□□ 1.11
SSH3-209ENST00000532600 RASIP1Q5U651 963 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 ARHGEF16Q5VV41 709 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 CREB3L3Q68CJ9 461 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 IL31RAQ8NI17 732 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 MTG1Q9BT17 334 aaPredicted RBP21.99■■□□□ 1.11
SSH3-209ENST00000532600 SEZ6LQ9BYH1 1024 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 WNT8AQ9H1J5 351 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 TTYH1Q9H313 450 aaPredicted RBP21.99■■□□□ 1.11
SSH3-209ENST00000532600 TRMT13Q9NUP7 481 aaKnown RBP21.99■■□□□ 1.11
SSH3-209ENST00000532600 STXBP5LQ9Y2K9 1186 aa21.99■■□□□ 1.11
SSH3-209ENST00000532600 SH2B2O14492 632 aaPredicted RBP21.98■■□□□ 1.11
SSH3-209ENST00000532600 PPIGQ13427 754 aaKnown RBP eCLIP21.98■■□□□ 1.117e-13■■■□□ 15.3
SSH3-209ENST00000532600 STXBP2Q15833 593 aa21.98■■□□□ 1.11
SSH3-209ENST00000532600 NBPF20Q3BBV1 942 aa21.98■■□□□ 1.11
SSH3-209ENST00000532600 CATIPQ7Z7H3 387 aa21.98■■□□□ 1.11
SSH3-209ENST00000532600 ZNF654Q8IZM8 581 aa21.98■■□□□ 1.11
SSH3-209ENST00000532600 PDCD2LQ9BRP1 358 aa21.98■■□□□ 1.11
SSH3-209ENST00000532600 HIPK3Q9H422 1215 aa21.98■■□□□ 1.11
SSH3-209ENST00000532600 DDX41Q9UJV9 622 aaKnown RBP21.98■■□□□ 1.11
SSH3-209ENST00000532600 PNMA6FA0A0J9YX94 578 aa21.97■■□□□ 1.11
SSH3-209ENST00000532600 TMEM199Q8N511 208 aa21.97■■□□□ 1.11
SSH3-209ENST00000532600 AFG1LQ8WV93 481 aa21.97■■□□□ 1.11
SSH3-209ENST00000532600 ANO2Q9NQ90 1003 aa21.97■■□□□ 1.11
SSH3-209ENST00000532600 EIF3JO75822 258 aaKnown RBP21.96■■□□□ 1.11
SSH3-209ENST00000532600 MMP3P08254 477 aa21.96■■□□□ 1.11
SSH3-209ENST00000532600 CYP2C9P11712 490 aa21.96■■□□□ 1.11
SSH3-209ENST00000532600 ZNF365Q70YC5 407 aa21.96■■□□□ 1.11
SSH3-209ENST00000532600 PIBF1Q8WXW3 757 aa21.96■■□□□ 1.11
SSH3-209ENST00000532600 KAT2BQ92831 832 aa21.96■■□□□ 1.11
SSH3-209ENST00000532600 MAP3K14Q99558 947 aa21.96■■□□□ 1.11
SSH3-209ENST00000532600 MTA3Q9BTC8 594 aa21.96■■□□□ 1.11
SSH3-209ENST00000532600 SEMA6BQ9H3T3 888 aa21.96■■□□□ 1.11
SSH3-209ENST00000532600 MAP3K20Q9NYL2 800 aaKnown RBP21.96■■□□□ 1.11
SSH3-209ENST00000532600 DDAH1O94760 285 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 MCM5P33992 734 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 CCL23P55773 120 aa21.95■■□□□ 1.1
SSH3-209ENST00000532600 PGM5Q15124 567 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms