RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SNRNP48Q6IEG0 339 aaKnown RBP14.4□□□□□ -0.1
COPB1-208ENST00000532088 GALNT17Q6IS24 598 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 CCDC174Q6PII3 467 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 ANKRD13CQ8N6S4 541 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 JMYQ8N9B5 988 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 PAGR1Q9BTK6 254 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 MROH8Q9H579 483 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 PCDHA1Q9Y5I3 950 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 MYH6P13533 1939 aa14.4□□□□□ -0.1
COPB1-208ENST00000532088 RCCD1A6NED2 376 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 STXBP3O00186 592 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 PDCP20941 246 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 SNAP25P60880 206 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 HEATR3Q7Z4Q2 680 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 MCF2L2Q86YR7 1114 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 CPXCR1Q8N123 301 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 AGBL1Q96MI9 1066 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 ALG1Q9BT22 464 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 MOV10L1Q9BXT6 1211 aaKnown RBP14.39□□□□□ -0.11
COPB1-208ENST00000532088 WBP1LQ9NX94 342 aa14.39□□□□□ -0.11
COPB1-208ENST00000532088 BAZ2BQ9UIF8 2168 aaKnown RBP14.39□□□□□ -0.11
COPB1-208ENST00000532088 CALML3P27482 149 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 GNA11P29992 359 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 MAPK4P31152 587 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 PDE4DQ08499 809 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 Q3C1V9 767 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 MCTP2Q6DN12 878 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 ABRAQ8N0Z2 381 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 DAGLBQ8NCG7 672 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 DDX11Q96FC9 970 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 TRERF1Q96PN7 1200 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 ZMYND12Q9H0C1 365 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 ACAD9Q9H845 621 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 CPA4Q9UI42 421 aa14.38□□□□□ -0.11
COPB1-208ENST00000532088 hCG_1642624A0A1W2PR95 340 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 PIK3CDO00329 1044 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 STRNO43815 780 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 TRPA1O75762 1119 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 ALAS1P13196 640 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 ERCC3P19447 782 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 DNAJB2P25686 324 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 NAPAP54920 295 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 TRIM29Q14134 588 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 PLS1Q14651 629 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 USH1GQ495M9 461 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 BICD2Q8TD16 824 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 CLEC4DQ8WXI8 215 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 PIBF1Q8WXW3 757 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 GPKOWQ92917 476 aaPredicted RBP eCLIP14.37□□□□□ -0.11
COPB1-208ENST00000532088 COA7Q96BR5 231 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 C8orf76Q96K31 380 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 PHF20Q9BVI0 1012 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 RIC8AQ9NPQ8 531 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 RNF146Q9NTX7 359 aa14.37□□□□□ -0.11
COPB1-208ENST00000532088 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
COPB1-208ENST00000532088 MRPL12P52815 198 aaKnown RBP14.36□□□□□ -0.11
COPB1-208ENST00000532088 NCAPG2Q86XI2 1143 aa14.36□□□□□ -0.11
COPB1-208ENST00000532088 FBXO18Q8NFZ0 1043 aa14.36□□□□□ -0.11
COPB1-208ENST00000532088 CUL5Q93034 780 aa14.36□□□□□ -0.11
COPB1-208ENST00000532088 PSTPIP2Q9H939 334 aa14.36□□□□□ -0.11
COPB1-208ENST00000532088 C6orf50Q9HD87 102 aa14.36□□□□□ -0.11
COPB1-208ENST00000532088 VPS54Q9P1Q0 977 aa14.36□□□□□ -0.11
COPB1-208ENST00000532088 RIPK3Q9Y572 518 aa14.36□□□□□ -0.11
COPB1-208ENST00000532088 PFASO15067 1338 aa14.36□□□□□ -0.11
COPB1-208ENST00000532088 RBBP6Q7Z6E9 1792 aaKnown RBP14.35□□□□□ -0.11
COPB1-208ENST00000532088 SMCO2A6NFE2 343 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 OPLAHO14841 1288 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 PPFIA3O75145 1194 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 TBC1D8O95759 1140 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 MMP1P03956 469 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 HSD17B4P51659 736 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 ADCY7P51828 1080 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 NLRP5P59047 1200 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 SP3Q02447 781 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 CCAR1Q8IX12 1150 aaKnown RBP14.35□□□□□ -0.11
COPB1-208ENST00000532088 SHISA4Q96DD7 197 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 AIFM3Q96NN9 605 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 IPO9Q96P70 1041 aaKnown RBP14.35□□□□□ -0.11
COPB1-208ENST00000532088 TMUB1Q9BVT8 246 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 BRMS1Q9HCU9 246 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 PCDHA4Q9UN74 947 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 ZNF236Q9UL36 1845 aa14.35□□□□□ -0.11
COPB1-208ENST00000532088 LOC102724159A0A0B4J2E5 919 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 GCOM1H8Y6P7 765 aaPredicted RBP14.34□□□□□ -0.11
COPB1-208ENST00000532088 GPR25O00155 361 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
COPB1-208ENST00000532088 GNRH1P01148 92 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 POLR2MP0CAP2 368 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 FCER1AP12319 257 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 CLK2P49760 499 aaKnown RBP14.34□□□□□ -0.11
COPB1-208ENST00000532088 LACTBP83111 547 aaPredicted RBP14.34□□□□□ -0.11
COPB1-208ENST00000532088 AP3B2Q13367 1082 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 PWP2Q15269 919 aaKnown RBP14.34□□□□□ -0.11
COPB1-208ENST00000532088 SAFBQ15424 915 aaKnown RBP eCLIP14.34□□□□□ -0.11
COPB1-208ENST00000532088 MUM1L1Q5H9M0 696 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 LARP1BQ659C4 914 aaKnown RBP14.34□□□□□ -0.11
COPB1-208ENST00000532088 KRT40Q6A162 431 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 GPR142Q7Z601 462 aa14.34□□□□□ -0.11
COPB1-208ENST00000532088 PLEKHH3Q7Z736 793 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms