RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 DLL1O00548 723 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 SUPT20HL2P0C7V6 817 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 PTH1RQ03431 593 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 SEC23AQ15436 765 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 STAG2Q8N3U4 1231 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 IWS1Q96ST2 819 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 RMDN3Q96TC7 470 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 AMNQ9BXJ7 453 aa25.95■■□□□ 1.74
TRAPPC4-210ENST00000531290 IFIT3O14879 490 aaKnown RBP25.94■■□□□ 1.74
TRAPPC4-210ENST00000531290 CYP21A2P08686 494 aa25.94■■□□□ 1.74
TRAPPC4-210ENST00000531290 CCL23P55773 120 aa25.94■■□□□ 1.74
TRAPPC4-210ENST00000531290 STXBP2Q15833 593 aa25.94■■□□□ 1.74
TRAPPC4-210ENST00000531290 RALYLQ86SE5 291 aaKnown RBP25.94■■□□□ 1.74
TRAPPC4-210ENST00000531290 COPS5Q92905 334 aa25.94■■□□□ 1.74
TRAPPC4-210ENST00000531290 NOC4LQ9BVI4 516 aaKnown RBP25.94■■□□□ 1.74
TRAPPC4-210ENST00000531290 A6NJR5 290 aa25.93■■□□□ 1.74
TRAPPC4-210ENST00000531290 FGBP02675 491 aa25.93■■□□□ 1.74
TRAPPC4-210ENST00000531290 DNAJB2P25686 324 aa25.93■■□□□ 1.74
TRAPPC4-210ENST00000531290 FAM47CQ5HY64 1035 aa25.93■■□□□ 1.74
TRAPPC4-210ENST00000531290 ARHGEF16Q5VV41 709 aa25.93■■□□□ 1.74
TRAPPC4-210ENST00000531290 SEPT14Q6ZU15 432 aa25.93■■□□□ 1.74
TRAPPC4-210ENST00000531290 MTIF3Q9H2K0 278 aaKnown RBP25.93■■□□□ 1.74
TRAPPC4-210ENST00000531290 COL20A1Q9P218 1284 aa25.93■■□□□ 1.74
TRAPPC4-210ENST00000531290 UMODL1Q5DID0 1318 aa25.92■■□□□ 1.74
TRAPPC4-210ENST00000531290 CFBP00751 764 aa25.92■■□□□ 1.74
TRAPPC4-210ENST00000531290 SART3Q15020 963 aaKnown RBP25.92■■□□□ 1.74
TRAPPC4-210ENST00000531290 MYLIPQ8WY64 445 aa25.92■■□□□ 1.74
TRAPPC4-210ENST00000531290 MAD2L2Q9UI95 211 aa25.92■■□□□ 1.74
TRAPPC4-210ENST00000531290 PALM3A6NDB9 673 aaPredicted RBP25.91■■□□□ 1.74
TRAPPC4-210ENST00000531290 SGSM2O43147 1006 aa25.91■■□□□ 1.74
TRAPPC4-210ENST00000531290 NBPF20Q3BBV1 942 aa25.91■■□□□ 1.74
TRAPPC4-210ENST00000531290 RASIP1Q5U651 963 aa25.91■■□□□ 1.74
TRAPPC4-210ENST00000531290 RPUSD2Q8IZ73 545 aaKnown RBP25.91■■□□□ 1.74
TRAPPC4-210ENST00000531290 NCOA7Q8NI08 942 aa25.91■■□□□ 1.74
TRAPPC4-210ENST00000531290 TIFAQ96CG3 184 aa25.91■■□□□ 1.74
TRAPPC4-210ENST00000531290 TRMT13Q9NUP7 481 aaKnown RBP25.91■■□□□ 1.74
TRAPPC4-210ENST00000531290 E7EWF7 191 aa25.9■■□□□ 1.74
TRAPPC4-210ENST00000531290 ZBTB5O15062 677 aa25.9■■□□□ 1.74
TRAPPC4-210ENST00000531290 ARIH2O95376 493 aa25.9■■□□□ 1.74
TRAPPC4-210ENST00000531290 TRAF1Q13077 416 aa25.9■■□□□ 1.74
TRAPPC4-210ENST00000531290 CCDC62Q6P9F0 684 aa25.9■■□□□ 1.74
TRAPPC4-210ENST00000531290 HERVK_113Q902F9 699 aa25.9■■□□□ 1.74
TRAPPC4-210ENST00000531290 PCDHA1Q9Y5I3 950 aa25.9■■□□□ 1.74
TRAPPC4-210ENST00000531290 EIF3JO75822 258 aaKnown RBP25.89■■□□□ 1.74
TRAPPC4-210ENST00000531290 GH1P01241 217 aa25.89■■□□□ 1.74
TRAPPC4-210ENST00000531290 CYP2C9P11712 490 aa25.89■■□□□ 1.74
TRAPPC4-210ENST00000531290 EIF2AK2P19525 551 aaKnown RBP25.89■■□□□ 1.74
TRAPPC4-210ENST00000531290 WTAPQ15007 396 aa25.89■■□□□ 1.74
TRAPPC4-210ENST00000531290 LY6KQ17RY6 165 aa25.89■■□□□ 1.74
TRAPPC4-210ENST00000531290 NFRKBQ6P4R8 1299 aa25.89■■□□□ 1.74
TRAPPC4-210ENST00000531290 MTMR8Q96EF0 704 aa25.89■■□□□ 1.74
TRAPPC4-210ENST00000531290 GRXCR1A8MXD5 290 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 FOSL2P15408 326 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 CHMP4BP1P59074 171 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 GRM4Q14833 912 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 OTOP2Q7RTS6 562 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 HOMER1Q86YM7 354 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 MAFAQ8NHW3 353 aaPredicted RBP25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 AFG1LQ8WV93 481 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 WNT8AQ9H1J5 351 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 ZNF576Q9H609 170 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 PXMP2Q9NR77 195 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 MAP3K20Q9NYL2 800 aaKnown RBP25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 A0A0C4DFX4 3053 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 LRRC37A2A6NM11 1700 aa25.88■■□□□ 1.73
TRAPPC4-210ENST00000531290 NR3C2P08235 984 aa25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 HSD17B4P51659 736 aa25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 PTPN11Q06124 597 aaPredicted RBP25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 TMEM67Q5HYA8 995 aa25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 CHST3Q7LGC8 479 aa25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 CATIPQ7Z7H3 387 aa25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 MAP4K1Q92918 833 aa25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 SCLYQ96I15 445 aa25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 PBX4Q9BYU1 374 aa25.87■■□□□ 1.73
TRAPPC4-210ENST00000531290 PPP1R11O60927 126 aaPredicted RBP25.86■■□□□ 1.73
TRAPPC4-210ENST00000531290 GRIN2CQ14957 1233 aa25.86■■□□□ 1.73
TRAPPC4-210ENST00000531290 SAMD3Q8N6K7 520 aa25.86■■□□□ 1.73
TRAPPC4-210ENST00000531290 CXXC1Q9P0U4 656 aaPredicted RBP25.86■■□□□ 1.73
TRAPPC4-210ENST00000531290 MSRAQ9UJ68 235 aa25.86■■□□□ 1.73
TRAPPC4-210ENST00000531290 NOD1Q9Y239 953 aa25.86■■□□□ 1.73
TRAPPC4-210ENST00000531290 MRVI1Q9Y6F6 885 aa25.86■■□□□ 1.73
TRAPPC4-210ENST00000531290 TAF6LQ9Y6J9 622 aa25.86■■□□□ 1.73
TRAPPC4-210ENST00000531290 OPLAHO14841 1288 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 CASTP20810 708 aaKnown RBP25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 PBX2P40425 430 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 ARHGAP1Q07960 439 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 RETREG2Q8NC44 543 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 PPP1R13LQ8WUF5 828 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 PIGSQ96S52 555 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 RIOX1Q9H6W3 641 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 SENP2Q9HC62 589 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 DDX41Q9UJV9 622 aaKnown RBP25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 LAMA4Q16363 1823 aa25.85■■□□□ 1.73
TRAPPC4-210ENST00000531290 MMP3P08254 477 aa25.84■■□□□ 1.73
TRAPPC4-210ENST00000531290 MYCLP12524 364 aaPredicted RBP25.84■■□□□ 1.73
TRAPPC4-210ENST00000531290 GHRHRQ02643 423 aa25.84■■□□□ 1.73
TRAPPC4-210ENST00000531290 TROAPQ12815 778 aa25.84■■□□□ 1.73
TRAPPC4-210ENST00000531290 RAB30Q15771 203 aa25.84■■□□□ 1.73
TRAPPC4-210ENST00000531290 STOX1Q6ZVD7 989 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms