RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 SYDE2Q5VT97 1194 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 SAMD1Q6SPF0 538 aaPredicted RBP5.51□□□□□ -1.53
SSBP3-213ENST00000530618 MCF2L2Q86YR7 1114 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 SAMD3Q8N6K7 520 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 KLHDC9Q8NEP7 349 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 GTF3C6Q969F1 213 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 KIFC2Q96AC6 838 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 VWCEQ96DN2 955 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 INTS4Q96HW7 963 aaKnown RBP5.51□□□□□ -1.53
SSBP3-213ENST00000530618 TCEANC2Q96MN5 208 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 NUP88Q99567 741 aaPredicted RBP5.51□□□□□ -1.53
SSBP3-213ENST00000530618 SPZ1Q9BXG8 430 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 COL25A1Q9BXS0 654 aaPredicted RBP5.51□□□□□ -1.53
SSBP3-213ENST00000530618 RNF26Q9BY78 433 aaPredicted RBP5.51□□□□□ -1.53
SSBP3-213ENST00000530618 MAF1Q9H063 256 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 MROH8Q9H579 483 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 INCENPQ9NQS7 918 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 IL17RBQ9NRM6 502 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 SLC5A4Q9NY91 659 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 FBXO40Q9UH90 709 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 PPP1R9AQ9ULJ8 1098 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 RIPK3Q9Y572 518 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 IVNS1ABPQ9Y6Y0 642 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 NID2Q14112 1375 aa5.51□□□□□ -1.53
SSBP3-213ENST00000530618 PRRC2BQ5JSZ5 2229 aaKnown RBP5.51□□□□□ -1.53
SSBP3-213ENST00000530618 FRMPD2Q68DX3 1309 aaPredicted RBP5.5□□□□□ -1.53
SSBP3-213ENST00000530618 STK36Q9NRP7 1315 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 SYNRGQ9UMZ2 1314 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 ATG2AQ2TAZ0 1938 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 PNMA6FA0A0J9YX94 578 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 ATP2A1O14983 1001 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 ZBTB5O15062 677 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 KIAA0355O15063 1070 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 SNAI1O95863 264 aaPredicted RBP5.5□□□□□ -1.53
SSBP3-213ENST00000530618 SNHG28P0DPA3 235 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 CPA1P15085 419 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 IFNAR1P17181 557 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 NKX3-2P78367 333 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 CCT2P78371 535 aaKnown RBP5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TLE2Q04725 743 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TROAPQ12815 778 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TOB2Q14106 344 aaPredicted RBP5.5□□□□□ -1.53
SSBP3-213ENST00000530618 RASIP1Q5U651 963 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 WDR78Q5VTH9 848 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 GALNT17Q6IS24 598 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 PPP1R18Q6NYC8 613 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 MAMDC4Q6UXC1 1216 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 BTNL9Q6UXG8 535 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TMTC3Q6ZXV5 915 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 KCTD1Q719H9 257 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 C16orf59Q7L2K0 433 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 RASGRP2Q7LDG7 609 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 DPP9Q86TI2 863 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 NCAPG2Q86XI2 1143 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 CCDC83Q8IWF9 413 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 CCDC144CPQ8IYA2 1237 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 RGS22Q8NE09 1264 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 BADQ92934 168 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TMX3Q96JJ7 454 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TINF2Q9BSI4 451 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 AMNQ9BXJ7 453 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 SLC26A6Q9BXS9 759 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TEX13BQ9BXU2 312 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 GPCPD1Q9NPB8 672 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 ORC3Q9UBD5 711 aaPredicted RBP5.5□□□□□ -1.53
SSBP3-213ENST00000530618 NRBP1Q9UHY1 535 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TBX21Q9UL17 535 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 ATP11BQ9Y2G3 1177 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 DIS3Q9Y2L1 958 aaKnown RBP5.5□□□□□ -1.53
SSBP3-213ENST00000530618 MRPL11Q9Y3B7 192 aaKnown RBP5.5□□□□□ -1.53
SSBP3-213ENST00000530618 ATP6V1DQ9Y5K8 247 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 TRIOO75962 3097 aa5.5□□□□□ -1.53
SSBP3-213ENST00000530618 COL4A4P53420 1690 aaPredicted RBP5.5□□□□□ -1.53
SSBP3-213ENST00000530618 ZNF536O15090 1300 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 ABCB11O95342 1321 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 TCF20Q9UGU0 1960 aaKnown RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 A0A1W2PQ45 241 aaPredicted RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 A0A1W2PQY0 241 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 PTPDC1A2A3K4 754 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 PALM3A6NDB9 673 aaPredicted RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 PGK1P00558 417 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 FCER1AP12319 257 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 SCG2P13521 617 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 PTGS1P23219 599 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 CST5P28325 142 aaPredicted RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 CNGA1P29973 690 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 STAT3P40763 770 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 CDK7P50613 346 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 NAPAP54920 295 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 NLRP5P59047 1200 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 SMAD3P84022 425 aaKnown RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 FAAP100Q0VG06 881 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 SCRN1Q12765 414 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 PLS1Q14651 629 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 CDC37Q16543 378 aaPredicted RBP5.49□□□□□ -1.53
SSBP3-213ENST00000530618 ANKRD33Q7Z3H0 272 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 HEATR3Q7Z4Q2 680 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 FBXO11Q86XK2 927 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 HOMER1Q86YM7 354 aa5.49□□□□□ -1.53
SSBP3-213ENST00000530618 ADGRF4Q8IZF3 695 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms