RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 ZNF333Q96JL9 665 aa24.49■■□□□ 1.51
CAPN1-220ENST00000530567 RMDN3Q96TC7 470 aa24.49■■□□□ 1.51
CAPN1-220ENST00000530567 PXMP2Q9NR77 195 aa24.49■■□□□ 1.51
CAPN1-220ENST00000530567 RPTORQ8N122 1335 aa24.49■■□□□ 1.51
CAPN1-220ENST00000530567 LOC102724159A0A0B4J2E5 919 aa24.48■■□□□ 1.51
CAPN1-220ENST00000530567 CACNB2Q08289 660 aaPredicted RBP24.48■■□□□ 1.51
CAPN1-220ENST00000530567 PWP2Q15269 919 aaKnown RBP24.48■■□□□ 1.51
CAPN1-220ENST00000530567 TRPV1Q8NER1 839 aa24.48■■□□□ 1.51
CAPN1-220ENST00000530567 KATNBL1Q9H079 304 aa24.48■■□□□ 1.51
CAPN1-220ENST00000530567 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.48■■□□□ 1.51
CAPN1-220ENST00000530567 ASB14A6NK59 587 aa24.47■■□□□ 1.51
CAPN1-220ENST00000530567 CYBAP13498 195 aa24.47■■□□□ 1.51
CAPN1-220ENST00000530567 PRKAR2AP13861 404 aaKnown RBP24.47■■□□□ 1.51
CAPN1-220ENST00000530567 IL31RAQ8NI17 732 aa24.47■■□□□ 1.51
CAPN1-220ENST00000530567 NSUN6Q8TEA1 469 aaKnown RBP24.47■■□□□ 1.51
CAPN1-220ENST00000530567 PHF20Q9BVI0 1012 aa24.47■■□□□ 1.51
CAPN1-220ENST00000530567 GLT8D2Q9H1C3 349 aa24.47■■□□□ 1.51
CAPN1-220ENST00000530567 C6orf50Q9HD87 102 aa24.47■■□□□ 1.51
CAPN1-220ENST00000530567 KCNJ14Q9UNX9 436 aa24.47■■□□□ 1.51
CAPN1-220ENST00000530567 EIF2AK2P19525 551 aaKnown RBP24.46■■□□□ 1.51
CAPN1-220ENST00000530567 NLRP5P59047 1200 aa24.46■■□□□ 1.51
CAPN1-220ENST00000530567 PDCD2LQ9BRP1 358 aa24.46■■□□□ 1.51
CAPN1-220ENST00000530567 TMEM260Q9NX78 707 aa24.46■■□□□ 1.51
CAPN1-220ENST00000530567 BIN2Q9UBW5 565 aaPredicted RBP24.46■■□□□ 1.51
CAPN1-220ENST00000530567 GNA11P29992 359 aa24.45■■□□□ 1.51
CAPN1-220ENST00000530567 MTFR1Q15390 333 aa24.45■■□□□ 1.51
CAPN1-220ENST00000530567 PRAMEF19Q5SWL8 479 aa24.45■■□□□ 1.51
CAPN1-220ENST00000530567 ARHGEF16Q5VV41 709 aa24.45■■□□□ 1.51
CAPN1-220ENST00000530567 HSCBQ8IWL3 235 aa24.45■■□□□ 1.51
CAPN1-220ENST00000530567 DAGLBQ8NCG7 672 aa24.45■■□□□ 1.51
CAPN1-220ENST00000530567 M0R2N6 131 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 ZNF865P0CJ78 1059 aaPredicted RBP24.44■■□□□ 1.5
CAPN1-220ENST00000530567 UBXN2AP68543 259 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 PGM5Q15124 567 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 REXO1Q8N1G1 1221 aaKnown RBP24.44■■□□□ 1.5
CAPN1-220ENST00000530567 RASGRP4Q8TDF6 673 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 IWS1Q96ST2 819 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 NRBP1Q9UHY1 535 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 PCDHA6Q9UN73 950 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 PCDHA4Q9UN74 947 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 PCDHA8Q9Y5H6 950 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 CCND3P30281 292 aaPredicted RBP24.44■■□□□ 1.5
CAPN1-220ENST00000530567 FOSBP53539 338 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 AP3B2Q13367 1082 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 PGBD1Q96JS3 809 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 ANO3Q9BYT9 981 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 UNC93B1Q9H1C4 597 aa24.44■■□□□ 1.5
CAPN1-220ENST00000530567 SPDYE3A6NKU9 549 aa24.43■■□□□ 1.5
CAPN1-220ENST00000530567 NR3C2P08235 984 aa24.43■■□□□ 1.5
CAPN1-220ENST00000530567 XBP1P17861 261 aa24.43■■□□□ 1.5
CAPN1-220ENST00000530567 JAKMIP3Q5VZ66 844 aa24.43■■□□□ 1.5
CAPN1-220ENST00000530567 GALNT17Q6IS24 598 aa24.43■■□□□ 1.5
CAPN1-220ENST00000530567 FBXO16Q8IX29 292 aaPredicted RBP24.43■■□□□ 1.5
CAPN1-220ENST00000530567 BICD2Q8TD16 824 aa24.43■■□□□ 1.5
CAPN1-220ENST00000530567 ABHD16BQ9H3Z7 469 aa24.43■■□□□ 1.5
CAPN1-220ENST00000530567 CNPY2Q9Y2B0 182 aa24.43■■□□□ 1.5
CAPN1-220ENST00000530567 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.43■■□□□ 1.5
CAPN1-220ENST00000530567 MYCP01106 439 aaPredicted RBP24.42■■□□□ 1.5
CAPN1-220ENST00000530567 CCL5P13501 91 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 GJB2P29033 226 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 PDE4DQ08499 809 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 ACVR2BQ13705 512 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 KRT40Q6A162 431 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 EEPD1Q7L9B9 569 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 VSIG10LQ86VR7 867 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 TNS4Q8IZW8 715 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 BLIDQ8IZY5 108 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 FAM184AQ8NB25 1140 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 ABHD8Q96I13 439 aa24.42■■□□□ 1.5
CAPN1-220ENST00000530567 FOSP01100 380 aaPredicted RBP24.41■■□□□ 1.5
CAPN1-220ENST00000530567 OXER1Q8TDS5 423 aa24.41■■□□□ 1.5
CAPN1-220ENST00000530567 INTS4Q96HW7 963 aaKnown RBP24.41■■□□□ 1.5
CAPN1-220ENST00000530567 C8orf76Q96K31 380 aa24.41■■□□□ 1.5
CAPN1-220ENST00000530567 MPHOSPH6Q99547 160 aaKnown RBP24.41■■□□□ 1.5
CAPN1-220ENST00000530567 HMX1Q9NP08 348 aaPredicted RBP24.41■■□□□ 1.5
CAPN1-220ENST00000530567 VTA1Q9NP79 307 aa24.41■■□□□ 1.5
CAPN1-220ENST00000530567 PAK6Q9NQU5 681 aaPredicted RBP24.41■■□□□ 1.5
CAPN1-220ENST00000530567 ZHX1Q9UKY1 873 aaPredicted RBP24.41■■□□□ 1.5
CAPN1-220ENST00000530567 SMC3Q9UQE7 1217 aa24.41■■□□□ 1.5
CAPN1-220ENST00000530567 BRCA2P51587 3418 aa24.41■■□□□ 1.5
CAPN1-220ENST00000530567 B4DLN1 442 aa24.4■■□□□ 1.5
CAPN1-220ENST00000530567 MMP1P03956 469 aa24.4■■□□□ 1.5
CAPN1-220ENST00000530567 SREBF1P36956 1147 aa24.4■■□□□ 1.5
CAPN1-220ENST00000530567 MRPS9P82933 396 aaKnown RBP24.4■■□□□ 1.5
CAPN1-220ENST00000530567 TAPT1Q6NXT6 567 aa24.4■■□□□ 1.5
CAPN1-220ENST00000530567 CRYGNQ8WXF5 182 aa24.4■■□□□ 1.5
CAPN1-220ENST00000530567 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.4■■□□□ 1.5
CAPN1-220ENST00000530567 KIAA1217Q5T5P2 1943 aa24.39■■□□□ 1.5
CAPN1-220ENST00000530567 RGS20O76081 388 aa24.39■■□□□ 1.5
CAPN1-220ENST00000530567 MYCLP12524 364 aaPredicted RBP24.39■■□□□ 1.5
CAPN1-220ENST00000530567 GUCY1B3Q02153 619 aa24.39■■□□□ 1.5
CAPN1-220ENST00000530567 STXBP2Q15833 593 aa24.39■■□□□ 1.5
CAPN1-220ENST00000530567 PCNX4Q63HM2 1172 aa24.39■■□□□ 1.5
CAPN1-220ENST00000530567 FBXO18Q8NFZ0 1043 aa24.39■■□□□ 1.5
CAPN1-220ENST00000530567 ZFP91Q96JP5 570 aaPredicted RBP24.39■■□□□ 1.5
CAPN1-220ENST00000530567 PDGFCQ9NRA1 345 aa24.39■■□□□ 1.5
CAPN1-220ENST00000530567 MYH7BA7E2Y1 1941 aa24.39■■□□□ 1.49
CAPN1-220ENST00000530567 SEPT4O43236 478 aa24.38■■□□□ 1.49
CAPN1-220ENST00000530567 ADCY6O43306 1168 aa24.38■■□□□ 1.49
CAPN1-220ENST00000530567 CCND2P30279 289 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms