RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 U3KPZ7 1027 aaPredicted RBP24.37■■□□□ 1.49
SMPD1-204ENST00000530395 SCN10AQ9Y5Y9 1956 aa24.36■■□□□ 1.49
SMPD1-204ENST00000530395 KPNA6O60684 536 aa24.36■■□□□ 1.49
SMPD1-204ENST00000530395 SUPT20HL2P0C7V6 817 aa24.36■■□□□ 1.49
SMPD1-204ENST00000530395 ACRP10323 421 aa24.36■■□□□ 1.49
SMPD1-204ENST00000530395 ZNF365Q70YC5 407 aa24.36■■□□□ 1.49
SMPD1-204ENST00000530395 NSUN6Q8TEA1 469 aaKnown RBP24.36■■□□□ 1.49
SMPD1-204ENST00000530395 NOC4LQ9BVI4 516 aaKnown RBP24.36■■□□□ 1.49
SMPD1-204ENST00000530395 SYTL5Q8TDW5 730 aaPredicted RBP24.35■■□□□ 1.49
SMPD1-204ENST00000530395 MYLIPQ8WY64 445 aa24.35■■□□□ 1.49
SMPD1-204ENST00000530395 FOSL2P15408 326 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 CHMLP26374 656 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 IRX6P78412 446 aaPredicted RBP24.34■■□□□ 1.49
SMPD1-204ENST00000530395 SEC23AQ15436 765 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 RASIP1Q5U651 963 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 CYB5R4Q7L1T6 521 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 TIFAQ96CG3 184 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 IWS1Q96ST2 819 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 RMDN3Q96TC7 470 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 AMNQ9BXJ7 453 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 UMODL1Q5DID0 1318 aa24.34■■□□□ 1.49
SMPD1-204ENST00000530395 ERICH2A1L162 156 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 A6NJR5 290 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 KLRF2D3W0D1 207 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 CCL23P55773 120 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 STXBP2Q15833 593 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 FAM47CQ5HY64 1035 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 RALYLQ86SE5 291 aaKnown RBP24.33■■□□□ 1.49
SMPD1-204ENST00000530395 MAFAQ8NHW3 353 aaPredicted RBP24.33■■□□□ 1.49
SMPD1-204ENST00000530395 TBC1D5Q92609 795 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 COPS5Q92905 334 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 TAAR1Q96RJ0 339 aa24.33■■□□□ 1.49
SMPD1-204ENST00000530395 FGBP02675 491 aa24.32■■□□□ 1.48
SMPD1-204ENST00000530395 CYP21A2P08686 494 aa24.32■■□□□ 1.48
SMPD1-204ENST00000530395 ARHGEF16Q5VV41 709 aa24.32■■□□□ 1.48
SMPD1-204ENST00000530395 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.32■■□□□ 1.48
SMPD1-204ENST00000530395 RPUSD2Q8IZ73 545 aaKnown RBP24.32■■□□□ 1.48
SMPD1-204ENST00000530395 STAG2Q8N3U4 1231 aa24.32■■□□□ 1.48
SMPD1-204ENST00000530395 HERVK_113Q902F9 699 aa24.32■■□□□ 1.48
SMPD1-204ENST00000530395 TRMT13Q9NUP7 481 aaKnown RBP24.32■■□□□ 1.48
SMPD1-204ENST00000530395 COL20A1Q9P218 1284 aa24.32■■□□□ 1.48
SMPD1-204ENST00000530395 PRUNE2Q8WUY3 3088 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 IFIT3O14879 490 aaKnown RBP24.31■■□□□ 1.48
SMPD1-204ENST00000530395 ARIH2O95376 493 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 CFBP00751 764 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 PTH1RQ03431 593 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 SART3Q15020 963 aaKnown RBP24.31■■□□□ 1.48
SMPD1-204ENST00000530395 NBPF20Q3BBV1 942 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 NFRKBQ6P4R8 1299 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 SEPT14Q6ZU15 432 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 WNT8AQ9H1J5 351 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 MAD2L2Q9UI95 211 aa24.31■■□□□ 1.48
SMPD1-204ENST00000530395 GBF1Q92538 1859 aa24.3■■□□□ 1.48
SMPD1-204ENST00000530395 ZBTB5O15062 677 aa24.3■■□□□ 1.48
SMPD1-204ENST00000530395 GH1P01241 217 aa24.3■■□□□ 1.48
SMPD1-204ENST00000530395 PTPN11Q06124 597 aaPredicted RBP24.3■■□□□ 1.48
SMPD1-204ENST00000530395 TRAF1Q13077 416 aa24.3■■□□□ 1.48
SMPD1-204ENST00000530395 CCDC62Q6P9F0 684 aa24.3■■□□□ 1.48
SMPD1-204ENST00000530395 NCOA7Q8NI08 942 aa24.3■■□□□ 1.48
SMPD1-204ENST00000530395 PBX4Q9BYU1 374 aa24.3■■□□□ 1.48
SMPD1-204ENST00000530395 ZNF576Q9H609 170 aa24.3■■□□□ 1.48
SMPD1-204ENST00000530395 PALM3A6NDB9 673 aaPredicted RBP24.29■■□□□ 1.48
SMPD1-204ENST00000530395 SGSM2O43147 1006 aa24.29■■□□□ 1.48
SMPD1-204ENST00000530395 CYP2C9P11712 490 aa24.29■■□□□ 1.48
SMPD1-204ENST00000530395 EIF2AK2P19525 551 aaKnown RBP24.29■■□□□ 1.48
SMPD1-204ENST00000530395 RAB30Q15771 203 aa24.29■■□□□ 1.48
SMPD1-204ENST00000530395 MTMR8Q96EF0 704 aa24.29■■□□□ 1.48
SMPD1-204ENST00000530395 PXMP2Q9NR77 195 aa24.29■■□□□ 1.48
SMPD1-204ENST00000530395 MAP3K20Q9NYL2 800 aaKnown RBP24.29■■□□□ 1.48
SMPD1-204ENST00000530395 MSRAQ9UJ68 235 aa24.29■■□□□ 1.48
SMPD1-204ENST00000530395 TANC1Q9C0D5 1861 aa24.29■■□□□ 1.48
SMPD1-204ENST00000530395 CHD9Q3L8U1 2897 aa24.29■■□□□ 1.48
SMPD1-204ENST00000530395 GRXCR1A8MXD5 290 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 EIF3JO75822 258 aaKnown RBP24.28■■□□□ 1.48
SMPD1-204ENST00000530395 PFKMP08237 780 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 HSD17B4P51659 736 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 GRM4Q14833 912 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 GRIN2CQ14957 1233 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 WTAPQ15007 396 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 OTOP2Q7RTS6 562 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 SCLYQ96I15 445 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 CXXC1Q9P0U4 656 aaPredicted RBP24.28■■□□□ 1.48
SMPD1-204ENST00000530395 NOD1Q9Y239 953 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 PCDHA1Q9Y5I3 950 aa24.28■■□□□ 1.48
SMPD1-204ENST00000530395 E7EWF7 191 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 MMP3P08254 477 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 PBX2P40425 430 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 GHRHRQ02643 423 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 ARHGAP1Q07960 439 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 LY6KQ17RY6 165 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 HOMER1Q86YM7 354 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 SAMD3Q8N6K7 520 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 AFG1LQ8WV93 481 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 BAZ2BQ9UIF8 2168 aaKnown RBP24.27■■□□□ 1.48
SMPD1-204ENST00000530395 MYH7BA7E2Y1 1941 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 SCN5AQ14524 2016 aa24.27■■□□□ 1.48
SMPD1-204ENST00000530395 NR3C2P08235 984 aa24.26■■□□□ 1.47
SMPD1-204ENST00000530395 CHMP4BP1P59074 171 aa24.26■■□□□ 1.47
SMPD1-204ENST00000530395 CHST3Q7LGC8 479 aa24.26■■□□□ 1.47
SMPD1-204ENST00000530395 MRVI1Q9Y6F6 885 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms