RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 NEK1Q96PY6 1258 aa21.83■■□□□ 1.09
PCNX3-203ENST00000530174 A0A0U1RQG5 324 aaPredicted RBP21.82■■□□□ 1.08
PCNX3-203ENST00000530174 RXRAP19793 462 aa21.82■■□□□ 1.08
PCNX3-203ENST00000530174 TRAF1Q13077 416 aa21.82■■□□□ 1.08
PCNX3-203ENST00000530174 PPP2R5BQ15173 497 aa21.82■■□□□ 1.08
PCNX3-203ENST00000530174 TOX2Q96NM4 488 aa21.82■■□□□ 1.08
PCNX3-203ENST00000530174 SPZ1Q9BXG8 430 aa21.82■■□□□ 1.08
PCNX3-203ENST00000530174 DCDC2CA8MYV0 355 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 ZEB2O60315 1214 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 EIF2AK2P19525 551 aaKnown RBP21.81■■□□□ 1.08
PCNX3-203ENST00000530174 CDK7P50613 346 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 FAAP100Q0VG06 881 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 TSGA10IPQ3SY00 556 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 ARHGEF16Q5VV41 709 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 RAB11FIP4Q86YS3 637 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 OR6J1Q8NGC5 347 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 BADQ92934 168 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 IWS1Q96ST2 819 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 PXMP2Q9NR77 195 aa21.81■■□□□ 1.08
PCNX3-203ENST00000530174 MROH7Q68CQ1 1323 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 ARVCFO00192 962 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 SOX1O00570 391 aaPredicted RBP21.8■■□□□ 1.08
PCNX3-203ENST00000530174 KIAA0355O15063 1070 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 CABYRO75952 493 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 PLEKHA8P1O95397 391 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 ITGB8P26012 769 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 HOXA13P31271 388 aaPredicted RBP21.8■■□□□ 1.08
PCNX3-203ENST00000530174 ADCK5Q3MIX3 580 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 SGMS1Q86VZ5 419 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 LZTS2Q9BRK4 669 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 TMEM39AQ9NV64 488 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 MAP3K20Q9NYL2 800 aaKnown RBP21.8■■□□□ 1.08
PCNX3-203ENST00000530174 SLC12A7Q9Y666 1083 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 LAMA3Q16787 3333 aa21.8■■□□□ 1.08
PCNX3-203ENST00000530174 NKRFO15226 690 aaKnown RBP eCLIP21.79■■□□□ 1.08
PCNX3-203ENST00000530174 ARIH2O95376 493 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 CALM1P0DP23 149 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 CALM2P0DP24 149 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 CALM3P0DP25 149 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 TXNP10599 105 aaKnown RBP21.79■■□□□ 1.08
PCNX3-203ENST00000530174 SMARCA1P28370 1054 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 GNAQP50148 359 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 TTLL4Q14679 1199 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 STXBP2Q15833 593 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 SEPT14Q6ZU15 432 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 SAMD3Q8N6K7 520 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 COPS5Q92905 334 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 RRP36Q96EU6 259 aaKnown RBP21.79■■□□□ 1.08
PCNX3-203ENST00000530174 TCEANC2Q96MN5 208 aa21.79■■□□□ 1.08
PCNX3-203ENST00000530174 GCOM1H8Y6P7 765 aaPredicted RBP21.78■■□□□ 1.08
PCNX3-203ENST00000530174 NR3C2P08235 984 aa21.78■■□□□ 1.08
PCNX3-203ENST00000530174 POLR2MP0CAP2 368 aa21.78■■□□□ 1.08
PCNX3-203ENST00000530174 CPT1AP50416 773 aa21.78■■□□□ 1.08
PCNX3-203ENST00000530174 EXOSC10Q01780 885 aaKnown RBP21.78■■□□□ 1.08
PCNX3-203ENST00000530174 KRT32Q14532 448 aa21.78■■□□□ 1.08
PCNX3-203ENST00000530174 CCDC62Q6P9F0 684 aa21.78■■□□□ 1.08
PCNX3-203ENST00000530174 DHX32Q7L7V1 743 aaKnown RBP21.78■■□□□ 1.08
PCNX3-203ENST00000530174 CMTR1Q8N1G2 835 aaKnown RBP21.78■■□□□ 1.08
PCNX3-203ENST00000530174 SRBD1Q8N5C6 995 aaKnown RBP21.78■■□□□ 1.08
PCNX3-203ENST00000530174 KIAA1217Q5T5P2 1943 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 RAG1P15918 1043 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 PSMC6P62333 389 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 ITGA7Q13683 1181 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 MICU3Q86XE3 530 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 FAM126BQ8IXS8 530 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 SLC43A3Q8NBI5 491 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 LRCH3Q96II8 777 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 PDCD2LQ9BRP1 358 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 PPP4R2Q9NY27 417 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 SEC63Q9UGP8 760 aaKnown RBP21.77■■□□□ 1.08
PCNX3-203ENST00000530174 TBX21Q9UL17 535 aa21.77■■□□□ 1.08
PCNX3-203ENST00000530174 GRIN2DO15399 1336 aa21.77■■□□□ 1.07
PCNX3-203ENST00000530174 EIF3JO75822 258 aaKnown RBP21.76■■□□□ 1.07
PCNX3-203ENST00000530174 LRIT3Q3SXY7 679 aa21.76■■□□□ 1.07
PCNX3-203ENST00000530174 APOA5Q6Q788 366 aa21.76■■□□□ 1.07
PCNX3-203ENST00000530174 FCHSD1Q86WN1 690 aa21.76■■□□□ 1.07
PCNX3-203ENST00000530174 FANCBQ8NB91 859 aa21.76■■□□□ 1.07
PCNX3-203ENST00000530174 KCNB2Q92953 911 aa21.76■■□□□ 1.07
PCNX3-203ENST00000530174 POLR3EQ9NVU0 708 aa21.76■■□□□ 1.07
PCNX3-203ENST00000530174 MYL3P08590 195 aa21.75■■□□□ 1.07
PCNX3-203ENST00000530174 HSPA4P34932 840 aa21.75■■□□□ 1.07
PCNX3-203ENST00000530174 PURAQ00577 322 aaKnown RBP21.75■■□□□ 1.07
PCNX3-203ENST00000530174 PGM5Q15124 567 aa21.75■■□□□ 1.07
PCNX3-203ENST00000530174 LY6KQ17RY6 165 aa21.75■■□□□ 1.07
PCNX3-203ENST00000530174 BRDTQ58F21 947 aaPredicted RBP21.75■■□□□ 1.07
PCNX3-203ENST00000530174 SYNE3Q6ZMZ3 975 aa21.75■■□□□ 1.07
PCNX3-203ENST00000530174 TMTC3Q6ZXV5 915 aa21.75■■□□□ 1.07
PCNX3-203ENST00000530174 IL31RAQ8NI17 732 aa21.75■■□□□ 1.07
PCNX3-203ENST00000530174 SZT2Q5T011 3432 aa21.75■■□□□ 1.07
PCNX3-203ENST00000530174 A6NJR5 290 aa21.74■■□□□ 1.07
PCNX3-203ENST00000530174 TLR3O15455 904 aaKnown RBP21.74■■□□□ 1.07
PCNX3-203ENST00000530174 CD4P01730 458 aa21.74■■□□□ 1.07
PCNX3-203ENST00000530174 MYCLP12524 364 aaPredicted RBP21.74■■□□□ 1.07
PCNX3-203ENST00000530174 ERICH6BQ5W0A0 696 aa21.74■■□□□ 1.07
PCNX3-203ENST00000530174 BRPF3Q9ULD4 1205 aa21.74■■□□□ 1.07
PCNX3-203ENST00000530174 SNX14Q9Y5W7 946 aa21.74■■□□□ 1.07
PCNX3-203ENST00000530174 REC8O95072 547 aa21.73■■□□□ 1.07
PCNX3-203ENST00000530174 TIMP1P01033 207 aa21.73■■□□□ 1.07
PCNX3-203ENST00000530174 GH1P01241 217 aa21.73■■□□□ 1.07
PCNX3-203ENST00000530174 HMGB1P09429 215 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms