RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 ZNF543Q08ER8 600 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 TCP10Q12799 353 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 NR5A1Q13285 461 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 CAMK4Q16566 473 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 CCDC96Q2M329 555 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 ARL6IP4Q66PJ3 421 aaKnown RBP9.32□□□□□ -0.92
CMTM1-214ENST00000530141 WWC2Q6AWC2 1192 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 CEP57L1Q8IYX8 460 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 GMCL1P1Q8NEA9 526 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 TNFRSF25Q93038 417 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 PRMT6Q96LA8 375 aaPredicted RBP9.32□□□□□ -0.92
CMTM1-214ENST00000530141 EPAS1Q99814 870 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 ZMYND12Q9H0C1 365 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 ARHGEF10LQ9HCE6 1279 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 HPSEQ9Y251 543 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 MGAMO43451 1857 aa9.32□□□□□ -0.92
CMTM1-214ENST00000530141 PNMA6FA0A0J9YX94 578 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 DDTLA6NHG4 134 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-214ENST00000530141 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 PPP1R12BO60237 982 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-214ENST00000530141 TOB1P50616 345 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-214ENST00000530141 INHBEP58166 350 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 NONOQ15233 471 aaKnown RBP eCLIP9.31□□□□□ -0.92
CMTM1-214ENST00000530141 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 USP17L2Q6R6M4 530 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 PIK3AP1Q6ZUJ8 805 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 LRRC47Q8N1G4 583 aaKnown RBP9.31□□□□□ -0.92
CMTM1-214ENST00000530141 DDX12PQ92771 950 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 GMCL1Q96IK5 515 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 PANK2Q9BZ23 570 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.31□□□□□ -0.92
CMTM1-214ENST00000530141 DACH1Q9UI36 760 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 FBXO2Q9UK22 296 aaPredicted RBP9.31□□□□□ -0.92
CMTM1-214ENST00000530141 KCNH3Q9ULD8 1083 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 MTMR7Q9Y216 660 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 MRVI1Q9Y6F6 885 aa9.31□□□□□ -0.92
CMTM1-214ENST00000530141 UNC80Q8N2C7 3258 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 hCG_1642624A0A1W2PR95 340 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 TESPA1A2RU30 521 aaPredicted RBP9.3□□□□□ -0.92
CMTM1-214ENST00000530141 SMCO2A6NFE2 343 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 GOLGA6L6A8MZA4 724 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 GOLGA6L19H0YKK7 550 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 CYTH3O43739 400 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 TPM3P06753 285 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 GOLGA8HP0CJ92 632 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 CCL5P13501 91 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 ATP2B1P20020 1258 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 LONP1P36776 959 aaKnown RBP9.3□□□□□ -0.92
CMTM1-214ENST00000530141 SLC1A4P43007 532 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 IREB2P48200 963 aaKnown RBP9.3□□□□□ -0.92
CMTM1-214ENST00000530141 ADCY7P51828 1080 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 MRPL12P52815 198 aaKnown RBP9.3□□□□□ -0.92
CMTM1-214ENST00000530141 LACTBP83111 547 aaPredicted RBP9.3□□□□□ -0.92
CMTM1-214ENST00000530141 ATP2C1P98194 919 aaPredicted RBP9.3□□□□□ -0.92
CMTM1-214ENST00000530141 ATP2B2Q01814 1243 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 VGLL4Q14135 290 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 RASA3Q14644 834 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 NPY5RQ15761 445 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 SHC4Q6S5L8 630 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.3□□□□□ -0.92
CMTM1-214ENST00000530141 SH3BP5LQ7L8J4 393 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 UBE2Q1Q7Z7E8 422 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 ZFPM1Q8IX07 1006 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 RNF214Q8ND24 703 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 CNNM3Q8NE01 707 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 PIBF1Q8WXW3 757 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 KIAA1468Q9P260 1216 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 CCDC39Q9UFE4 941 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 CPA4Q9UI42 421 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 PCDHB6Q9Y5E3 794 aa9.3□□□□□ -0.92
CMTM1-214ENST00000530141 MYH6P13533 1939 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 SMTNL1A8MU46 457 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 BECN2A8MW95 431 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 TCP10L2B9ZVM9 353 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 M0R2N6 131 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 ZBTB5O15062 677 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 FARP2O94887 1054 aaPredicted RBP9.29□□□□□ -0.92
CMTM1-214ENST00000530141 SMC2O95347 1197 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 EEF2P13639 858 aaKnown RBP9.29□□□□□ -0.92
CMTM1-214ENST00000530141 PRPHP41219 470 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 ZNF165P49910 485 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 CACNB3P54284 484 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 NLRP12P59046 1061 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 ZNF174Q15697 407 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 ANO6Q4KMQ2 910 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 CT47A1Q5JQC4 288 aaPredicted RBP9.29□□□□□ -0.92
CMTM1-214ENST00000530141 KRBA2Q6ZNG9 492 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 HOMER1Q86YM7 354 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 ANKRD13AQ8IZ07 590 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 DEFB123Q8N688 67 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 TRIML1Q8N9V2 468 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 GPKOWQ92917 476 aaPredicted RBP eCLIP9.29□□□□□ -0.92
CMTM1-214ENST00000530141 PDLIM2Q96JY6 352 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 PIGSQ96S52 555 aa9.29□□□□□ -0.92
CMTM1-214ENST00000530141 BPIFA3Q9BQP9 254 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms