RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SNRPB2P08579 225 aaKnown RBP7.36□□□□□ -1.23
USP47-209ENST00000530041 INF2Q27J81 1249 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 SLC10A6Q3KNW5 377 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 WWC2Q6AWC2 1192 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 DPF3Q92784 378 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 PEX11GQ96HA9 241 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 RNF38Q9H0F5 515 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 RXFP1Q9HBX9 757 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 CAPNS1P04632 268 aa7.35□□□□□ -1.23
USP47-209ENST00000530041 ECI1P42126 302 aa7.35□□□□□ -1.23
USP47-209ENST00000530041 AFF3P51826 1226 aaKnown RBP7.35□□□□□ -1.23
USP47-209ENST00000530041 SLC9A5Q14940 896 aa7.35□□□□□ -1.23
USP47-209ENST00000530041 NAALADL2Q58DX5 795 aa7.35□□□□□ -1.23
USP47-209ENST00000530041 KREMEN2Q8NCW0 462 aa7.35□□□□□ -1.23
USP47-209ENST00000530041 PLEKHO2Q8TD55 490 aa7.35□□□□□ -1.23
USP47-209ENST00000530041 PLA2G2DQ9UNK4 145 aa7.35□□□□□ -1.23
USP47-209ENST00000530041 MEFVO15553 781 aaPredicted RBP7.34□□□□□ -1.23
USP47-209ENST00000530041 ZBTB7AO95365 584 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 NTRK1P04629 796 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 NCAM1P13591 858 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 GFRA1P56159 465 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 TESK1Q15569 626 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 SF1Q15637 639 aaKnown RBP7.34□□□□□ -1.23
USP47-209ENST00000530041 ACBD5Q5T8D3 534 aaPredicted RBP7.34□□□□□ -1.23
USP47-209ENST00000530041 CCDC103Q8IW40 242 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 ALG3Q92685 438 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 DIO2Q92813 273 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 MARCH2Q9P0N8 246 aa7.34□□□□□ -1.23
USP47-209ENST00000530041 TMEFF2Q9UIK5 374 aaPredicted RBP7.34□□□□□ -1.23
USP47-209ENST00000530041 ARNTLO00327 626 aa7.33□□□□□ -1.24
USP47-209ENST00000530041 ASGR2P07307 311 aa7.33□□□□□ -1.24
USP47-209ENST00000530041 KCNJ6P48051 423 aa7.33□□□□□ -1.24
USP47-209ENST00000530041 RPL11P62913 178 aaKnown RBP7.33□□□□□ -1.24
USP47-209ENST00000530041 KCNAB2Q13303 367 aa7.33□□□□□ -1.24
USP47-209ENST00000530041 RAB33AQ14088 237 aa7.33□□□□□ -1.24
USP47-209ENST00000530041 PRSS53Q2L4Q9 553 aa7.33□□□□□ -1.24
USP47-209ENST00000530041 PWWP2AQ96N64 755 aa7.33□□□□□ -1.24
USP47-209ENST00000530041 TIMM13Q9Y5L4 95 aaPredicted RBP7.33□□□□□ -1.24
USP47-209ENST00000530041 A0A1W2PQU0 124 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 ATF2P15336 505 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 LIMS1P48059 325 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 GTF2A2P52657 109 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 PPP2R2AP63151 447 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 FOXO4P98177 505 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 CAP1Q01518 475 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 TTLL10Q6ZVT0 673 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 DCP2Q8IU60 420 aaKnown RBP7.32□□□□□ -1.24
USP47-209ENST00000530041 TEX2Q8IWB9 1127 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 PPIL6Q8IXY8 311 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 NLGN1Q8N2Q7 840 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 TMEM145Q8NBT3 493 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 BTG4Q9NY30 223 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 RAPGEFL1Q9UHV5 662 aa7.32□□□□□ -1.24
USP47-209ENST00000530041 C22orf46C9J442 243 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 MYO1BO43795 1136 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 STK10O94804 968 aaKnown RBP7.31□□□□□ -1.24
USP47-209ENST00000530041 BMP7P18075 431 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 PMLP29590 882 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 GRIA2P42262 883 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 SLC35F1Q5T1Q4 408 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 Q8N1Y9 231 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 MARCH10Q8NA82 808 aaPredicted RBP7.31□□□□□ -1.24
USP47-209ENST00000530041 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 SGSM3Q96HU1 749 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 BCAS3Q9H6U6 928 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 FAN1Q9Y2M0 1017 aa7.31□□□□□ -1.24
USP47-209ENST00000530041 INHBBP09529 407 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 LTBRP36941 435 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 MC3RP41968 323 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 MAP4K2Q12851 820 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 MROH9Q5TGP6 573 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 DENND5AQ6IQ26 1287 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 RIOX2Q8IUF8 465 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 CKAP2LQ8IYA6 745 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 RCBTB1Q8NDN9 531 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 ST13P5Q8NFI4 369 aaPredicted RBP7.3□□□□□ -1.24
USP47-209ENST00000530041 CPA5Q8WXQ8 436 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 KCNC2Q96PR1 638 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 TRIM55Q9BYV6 548 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 AP5M1Q9H0R1 490 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 SIT1Q9Y3P8 196 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 X6R8D5 127 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 ADAMTS20P59510 1910 aa7.3□□□□□ -1.24
USP47-209ENST00000530041 IQCA1LA6NCM1 817 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 TRIM13O60858 407 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 FPR2P25090 351 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 BCL6P41182 706 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 HSP90AA2PQ14568 343 aaPredicted RBP7.29□□□□□ -1.24
USP47-209ENST00000530041 VMACQ2NL98 169 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 LCE4AQ5TA78 99 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 CEP68Q76N32 757 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 B3GNT8Q7Z7M8 397 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 LINC01356Q8N9X3 169 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 KCTD13Q8WZ19 329 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 SEC14L1Q92503 715 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 TRMT2BQ96GJ1 504 aaKnown RBP7.29□□□□□ -1.24
USP47-209ENST00000530041 C8orf37Q96NL8 207 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 ZCCHC4Q9H5U6 513 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 PARD6AQ9NPB6 346 aa7.29□□□□□ -1.24
USP47-209ENST00000530041 NPFFR2Q9Y5X5 522 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms