RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
SF3B2-208ENST00000529994 PLA2G6O60733 806 aa13.38□□□□□ -0.27
SF3B2-208ENST00000529994 CALML3P27482 149 aa13.38□□□□□ -0.27
SF3B2-208ENST00000529994 KCNJ6P48051 423 aa13.38□□□□□ -0.27
SF3B2-208ENST00000529994 OTUD7AQ8TE49 926 aaPredicted RBP13.38□□□□□ -0.27
SF3B2-208ENST00000529994 ARIH1Q9Y4X5 557 aaPredicted RBP13.38□□□□□ -0.27
SF3B2-208ENST00000529994 FRMPD2Q68DX3 1309 aaPredicted RBP13.38□□□□□ -0.27
SF3B2-208ENST00000529994 PIEZO1Q92508 2521 aa13.37□□□□□ -0.27
SF3B2-208ENST00000529994 RBM47A0AV96 593 aaKnown RBP13.37□□□□□ -0.27
SF3B2-208ENST00000529994 GPR37L1O60883 481 aa13.37□□□□□ -0.27
SF3B2-208ENST00000529994 BFSP2Q13515 415 aa13.37□□□□□ -0.27
SF3B2-208ENST00000529994 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
SF3B2-208ENST00000529994 BRDTQ58F21 947 aaPredicted RBP13.37□□□□□ -0.27
SF3B2-208ENST00000529994 NFRKBQ6P4R8 1299 aa13.37□□□□□ -0.27
SF3B2-208ENST00000529994 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
SF3B2-208ENST00000529994 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
SF3B2-208ENST00000529994 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
SF3B2-208ENST00000529994 WDR5P61964 334 aaKnown RBP13.36□□□□□ -0.27
SF3B2-208ENST00000529994 DEFB103AP81534 67 aa13.36□□□□□ -0.27
SF3B2-208ENST00000529994 PDE4DQ08499 809 aa13.36□□□□□ -0.27
SF3B2-208ENST00000529994 PTGISQ16647 500 aa13.36□□□□□ -0.27
SF3B2-208ENST00000529994 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
SF3B2-208ENST00000529994 ALYREFQ86V81 257 aaKnown RBP13.36□□□□□ -0.27
SF3B2-208ENST00000529994 RANBP17Q9H2T7 1088 aaKnown RBP13.36□□□□□ -0.27
SF3B2-208ENST00000529994 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
SF3B2-208ENST00000529994 RAD50Q92878 1312 aa13.36□□□□□ -0.27
SF3B2-208ENST00000529994 A6NJR5 290 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 PI4K2BG5E9Z4 385 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 BAIAP3O94812 1187 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 TXNP10599 105 aaKnown RBP13.35□□□□□ -0.27
SF3B2-208ENST00000529994 GPNMBQ14956 572 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 TCTN1Q2MV58 587 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 SYDE2Q5VT97 1194 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 FAM117BQ6P1L5 589 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 RNF207Q6ZRF8 634 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 SUGCTQ9HAC7 445 aa13.35□□□□□ -0.27
SF3B2-208ENST00000529994 SIP14410 1827 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 NKRFO15226 690 aaKnown RBP eCLIP13.34□□□□□ -0.27
SF3B2-208ENST00000529994 KPNA6O60684 536 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 ARIH2O95376 493 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 PTPN11Q06124 597 aaPredicted RBP13.34□□□□□ -0.27
SF3B2-208ENST00000529994 GDF6Q6KF10 455 aaPredicted RBP13.34□□□□□ -0.27
SF3B2-208ENST00000529994 EXOC6Q8TAG9 804 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 SCFD2Q8WU76 684 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 CLEC4DQ8WXI8 215 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 CTAGE1Q96RT6 745 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
SF3B2-208ENST00000529994 UBE2ZQ9H832 354 aaPredicted RBP13.34□□□□□ -0.27
SF3B2-208ENST00000529994 FOXP2O15409 715 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 MX1P20591 662 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 KCNA5P22460 613 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 SSTR3P32745 418 aaPredicted RBP13.33□□□□□ -0.28
SF3B2-208ENST00000529994 RPS6P62753 249 aaKnown RBP13.33□□□□□ -0.28
SF3B2-208ENST00000529994 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
SF3B2-208ENST00000529994 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 CHST3Q7LGC8 479 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 GJD3Q8N144 294 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 CCDC155Q8N6L0 562 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 AFG1LQ8WV93 481 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
SF3B2-208ENST00000529994 TOMM22Q9NS69 142 aa13.33□□□□□ -0.28
SF3B2-208ENST00000529994 SUPT16HQ9Y5B9 1047 aaKnown RBP13.33□□□□□ -0.28
SF3B2-208ENST00000529994 LOC102724159A0A0B4J2E5 919 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 LINC01553A4QN01 128 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 NBNO60934 754 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 IL9P15248 144 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 SELPP16109 830 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 EDNRBP24530 442 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 IRX6P78412 446 aaPredicted RBP13.32□□□□□ -0.28
SF3B2-208ENST00000529994 PWP2Q15269 919 aaKnown RBP13.32□□□□□ -0.28
SF3B2-208ENST00000529994 LY6KQ17RY6 165 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 RRP12Q5JTH9 1297 aaKnown RBP13.32□□□□□ -0.28
SF3B2-208ENST00000529994 B4GALNT3Q6L9W6 998 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 CNKSR3Q6P9H4 555 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 BTNL9Q6UXG8 535 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 LRRC8DQ7L1W4 858 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 FAM178BQ8IXR5 827 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.32□□□□□ -0.28
SF3B2-208ENST00000529994 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 PI4K2BQ8TCG2 481 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
SF3B2-208ENST00000529994 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
SF3B2-208ENST00000529994 TMEM47Q9BQJ4 181 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 LMCD1Q9NZU5 365 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
SF3B2-208ENST00000529994 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
SF3B2-208ENST00000529994 GJB5O95377 273 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 MMP3P08254 477 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 ERVK-21P61565 698 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 USH1GQ495M9 461 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 VPS53Q5VIR6 699 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 SEPT14Q6ZU15 432 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 KAT2BQ92831 832 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 RAD9AQ99638 391 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 LNPKQ9C0E8 428 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms