RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 B3GNT8Q7Z7M8 397 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 VPS37DQ86XT2 251 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 CPNE8Q86YQ8 564 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 TEX2Q8IWB9 1127 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 DHX37Q8IY37 1157 aaKnown RBP5.28□□□□□ -1.56
CTR9-205ENST00000529898 NPLOC4Q8TAT6 608 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 PLEKHO2Q8TD55 490 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 DPF3Q92784 378 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 ANAPC16Q96DE5 110 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 PEX11GQ96HA9 241 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 NKX2-4Q9H2Z4 354 aa5.28□□□□□ -1.56
CTR9-205ENST00000529898 A0A0U1RQG5 324 aaPredicted RBP5.27□□□□□ -1.57
CTR9-205ENST00000529898 SH3D21A4FU49 640 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 SMAD7O15105 426 aaKnown RBP5.27□□□□□ -1.57
CTR9-205ENST00000529898 NPHS1O60500 1241 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 SASH1O94885 1247 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 KCNH1O95259 989 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 PLA2G1BP04054 148 aaKnown RBP5.27□□□□□ -1.57
CTR9-205ENST00000529898 SCG5P05408 212 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 ERCC5P28715 1186 aaPredicted RBP5.27□□□□□ -1.57
CTR9-205ENST00000529898 TNNI3KQ59H18 835 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 GTF2IRD2BQ6EKJ0 949 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 IQCEQ6IPM2 695 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 SAPCD2Q86UD0 394 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 GTF2IRD2Q86UP8 949 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 CABP7Q86V35 215 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 SP8Q8IXZ3 490 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 Q8N1Y9 231 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 CXorf38Q8TB03 319 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 FNIP1Q8TF40 1166 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 RELTQ969Z4 430 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 CAPN10Q9HC96 672 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 PRKAG3Q9UGI9 489 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 RWDD3Q9Y3V2 267 aa5.27□□□□□ -1.57
CTR9-205ENST00000529898 OTOL1A6NHN0 477 aaPredicted RBP5.26□□□□□ -1.57
CTR9-205ENST00000529898 B8ZZF3 427 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 ARNTLO00327 626 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 NOP56O00567 594 aaKnown RBP5.26□□□□□ -1.57
CTR9-205ENST00000529898 THBDP07204 575 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 FGRP09769 529 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 PLS3P13797 630 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 TCF3P15923 654 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 LIMS1P48059 325 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 DLX2Q07687 328 aaPredicted RBP5.26□□□□□ -1.57
CTR9-205ENST00000529898 SCRN1Q12765 414 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 MBLAC2Q68D91 279 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 WWC2Q6AWC2 1192 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 FRS2Q8WU20 508 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 GPRC5CQ9NQ84 441 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 CLEC1BQ9P126 229 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 GULP1Q9UBP9 304 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 NUDT5Q9UKK9 219 aa5.26□□□□□ -1.57
CTR9-205ENST00000529898 EIF4G1Q04637 1599 aaKnown RBP5.25□□□□□ -1.57
CTR9-205ENST00000529898 FOXD2O60548 495 aaPredicted RBP5.25□□□□□ -1.57
CTR9-205ENST00000529898 CLSTN1O94985 981 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 PMLP29590 882 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 HOXC12P31275 282 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 VMACQ2NL98 169 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 E4F1Q66K89 784 aaPredicted RBP5.25□□□□□ -1.57
CTR9-205ENST00000529898 C6orf15Q6UXA7 325 aaPredicted RBP5.25□□□□□ -1.57
CTR9-205ENST00000529898 FAM178BQ8IXR5 827 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 KREMEN2Q8NCW0 462 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 ALG3Q92685 438 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 CCDC140Q96MF4 163 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 GMLQ99445 158 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 TINF2Q9BSI4 451 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 ACTR10Q9NZ32 417 aa5.25□□□□□ -1.57
CTR9-205ENST00000529898 DBR1Q9UK59 544 aaKnown RBP5.25□□□□□ -1.57
CTR9-205ENST00000529898 NAP1L2Q9ULW6 460 aaPredicted RBP5.25□□□□□ -1.57
CTR9-205ENST00000529898 CENPJQ9HC77 1338 aaPredicted RBP5.24□□□□□ -1.57
CTR9-205ENST00000529898 SCRIBQ14160 1630 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 ITGAVP06756 1048 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 ETFBP38117 255 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 SLURP1P55000 103 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 CACNB2Q08289 660 aaPredicted RBP5.24□□□□□ -1.57
CTR9-205ENST00000529898 NFIXQ14938 502 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 INF2Q27J81 1249 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 FRMD5Q7Z6J6 570 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 RIOX2Q8IUF8 465 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 LINC00482Q8N8I6 264 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 SLC43A3Q8NBI5 491 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 TEPSINQ96N21 525 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 PUS7Q96PZ0 661 aaKnown RBP5.24□□□□□ -1.57
CTR9-205ENST00000529898 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 EPN3Q9H201 632 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 CCDC9Q9Y3X0 531 aaKnown RBP5.24□□□□□ -1.57
CTR9-205ENST00000529898 PMF1-BGLAPU3KQ54 211 aa5.24□□□□□ -1.57
CTR9-205ENST00000529898 SUSD5O60279 629 aa5.23□□□□□ -1.57
CTR9-205ENST00000529898 FUCA1P04066 466 aa5.23□□□□□ -1.57
CTR9-205ENST00000529898 NTRK1P04629 796 aa5.23□□□□□ -1.57
CTR9-205ENST00000529898 SSBP05455 408 aaKnown RBP eCLIP5.23□□□□□ -1.57
CTR9-205ENST00000529898 MC3RP41968 323 aa5.23□□□□□ -1.57
CTR9-205ENST00000529898 SLC6A11P48066 632 aa5.23□□□□□ -1.57
CTR9-205ENST00000529898 GNL2Q13823 731 aaKnown RBP5.23□□□□□ -1.57
CTR9-205ENST00000529898 FXNQ16595 210 aa5.23□□□□□ -1.57
CTR9-205ENST00000529898 ZFYVE27Q5T4F4 411 aa5.23□□□□□ -1.57
CTR9-205ENST00000529898 ACBD5Q5T8D3 534 aaPredicted RBP5.23□□□□□ -1.57
CTR9-205ENST00000529898 MRM1Q6IN84 353 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms