RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 INF2Q27J81 1249 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 MZB1Q8WU39 189 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 MKL1Q969V6 931 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 MMP19Q99542 508 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 MARCH2Q9P0N8 246 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 IRAK3Q9Y616 596 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 TLDC2A0PJX2 215 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 N4BP3O15049 544 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 MEFVO15553 781 aaPredicted RBP6.86□□□□□ -1.31
C11orf88-204ENST00000529661 CPP00450 1065 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 GLI4P10075 376 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 GFRA1P56159 465 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 PRR5P85299 388 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 CIAPIN1Q6FI81 312 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 SPOCD1Q6ZMY3 1216 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 LDHDQ86WU2 507 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 C1QL4Q86Z23 238 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 PPIL6Q8IXY8 311 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 TMEM145Q8NBT3 493 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 ZSCAN18Q8TBC5 510 aaPredicted RBP6.86□□□□□ -1.31
C11orf88-204ENST00000529661 DIO2Q92813 273 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 CCDC140Q96MF4 163 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 MTA3Q9BTC8 594 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 SIRPGQ9P1W8 387 aa6.86□□□□□ -1.31
C11orf88-204ENST00000529661 TMEFF2Q9UIK5 374 aaPredicted RBP6.86□□□□□ -1.31
C11orf88-204ENST00000529661 SCG5P05408 212 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 PI3P19957 117 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 CANXP27824 592 aaKnown RBP6.85□□□□□ -1.31
C11orf88-204ENST00000529661 SSPNQ14714 243 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 IQCEQ6IPM2 695 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 CCDC103Q8IW40 242 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 TEX2Q8IWB9 1127 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 DPF3Q92784 378 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 SIGLEC10Q96LC7 697 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 IER2Q9BTL4 223 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 IRF2BPLQ9H1B7 796 aa6.85□□□□□ -1.31
C11orf88-204ENST00000529661 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.85□□□□□ -1.31
C11orf88-204ENST00000529661 IQCA1LA6NCM1 817 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 MYO1BO43795 1136 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 NTRK1P04629 796 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 KCNAB2Q13303 367 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 NFE2L2Q16236 605 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 E4F1Q66K89 784 aaPredicted RBP6.84□□□□□ -1.31
C11orf88-204ENST00000529661 KREMEN2Q8NCW0 462 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 ST13P5Q8NFI4 369 aaPredicted RBP6.84□□□□□ -1.31
C11orf88-204ENST00000529661 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 NUDT5Q9UKK9 219 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 CDK11AQ9UQ88 783 aaPredicted RBP6.84□□□□□ -1.31
C11orf88-204ENST00000529661 KCTD3Q9Y597 815 aa6.84□□□□□ -1.31
C11orf88-204ENST00000529661 C22orf46C9J442 243 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 RFXAPO00287 272 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 ARNTLO00327 626 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 LTBRP36941 435 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 RPL11P62913 178 aaKnown RBP6.83□□□□□ -1.32
C11orf88-204ENST00000529661 HSP90AA2PQ14568 343 aaPredicted RBP6.83□□□□□ -1.32
C11orf88-204ENST00000529661 LRP10Q7Z4F1 713 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 IGDCC3Q8IVU1 814 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 NETO2Q8NC67 525 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 KCTD13Q8WZ19 329 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 PEX11GQ96HA9 241 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 AARSD1Q9BTE6 412 aaKnown RBP6.83□□□□□ -1.32
C11orf88-204ENST00000529661 PLA2G2DQ9UNK4 145 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 PCDHA5Q9Y5H7 936 aa6.83□□□□□ -1.32
C11orf88-204ENST00000529661 TIMM13Q9Y5L4 95 aaPredicted RBP6.83□□□□□ -1.32
C11orf88-204ENST00000529661 BUB1BO60566 1050 aaPredicted RBP6.82□□□□□ -1.32
C11orf88-204ENST00000529661 ZSCAN22P10073 491 aaPredicted RBP6.82□□□□□ -1.32
C11orf88-204ENST00000529661 FPR2P25090 351 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 BCL6P41182 706 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 RBM10P98175 930 aaKnown RBP6.82□□□□□ -1.32
C11orf88-204ENST00000529661 MTERF2Q49AM1 385 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 ZNF385BQ569K4 471 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 ACBD5Q5T8D3 534 aaPredicted RBP6.82□□□□□ -1.32
C11orf88-204ENST00000529661 DENND5AQ6IQ26 1287 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 PLEKHO2Q8TD55 490 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 ALG3Q92685 438 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 C1orf159Q96HA4 380 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 SGSM3Q96HU1 749 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 CHAMP1Q96JM3 812 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 SIT1Q9Y3P8 196 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 TBX22Q9Y458 520 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 PCDHA2Q9Y5H9 948 aa6.82□□□□□ -1.32
C11orf88-204ENST00000529661 PDPK1O15530 556 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 PRODHO43272 600 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 LCP1P13796 627 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 PFKLP17858 780 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 MAP4K2Q12851 820 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 BMS1Q14692 1282 aaKnown RBP6.81□□□□□ -1.32
C11orf88-204ENST00000529661 TARBP2Q15633 366 aaKnown RBP6.81□□□□□ -1.32
C11orf88-204ENST00000529661 SLC35F1Q5T1Q4 408 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 USP53Q70EK8 1073 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 CEP68Q76N32 757 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 LRRC47Q8N1G4 583 aaKnown RBP6.81□□□□□ -1.32
C11orf88-204ENST00000529661 RCBTB1Q8NDN9 531 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 ARHGEF4Q9NR80 690 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 PFDN2Q9UHV9 154 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 FBXL7Q9UJT9 491 aa6.81□□□□□ -1.32
C11orf88-204ENST00000529661 IRS4O14654 1257 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms