RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 PLS3P13797 630 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 INF2Q27J81 1249 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 NSMFQ6X4W1 530 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 USP53Q70EK8 1073 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 LRRC47Q8N1G4 583 aaKnown RBP5.71□□□□□ -1.5
TCN1-202ENST00000529251 JMYQ8N9B5 988 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 THAP3Q8WTV1 239 aaPredicted RBP5.71□□□□□ -1.5
TCN1-202ENST00000529251 CLUHP3Q96NS8 147 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 JMJD8Q96S16 334 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 CDC6Q99741 560 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 EPN3Q9H201 632 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 FBXL7Q9UJT9 491 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 ACSL6Q9UKU0 697 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 CD2APQ9Y5K6 639 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 TAF6LQ9Y6J9 622 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 SHROOM4Q9ULL8 1493 aa5.71□□□□□ -1.5
TCN1-202ENST00000529251 TRBV23-1A0A0A0MS06 115 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 NUAK1O60285 661 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 MSCO60682 206 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 PPP1R11O60927 126 aaPredicted RBP5.7□□□□□ -1.5
TCN1-202ENST00000529251 RAPGEF3O95398 923 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 VIPR1P32241 457 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 SRSF3P84103 164 aaKnown RBP5.7□□□□□ -1.5
TCN1-202ENST00000529251 LAPTM5Q13571 262 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 TMEM132EQ6IEE7 984 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 COPS5Q92905 334 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 KISS1RQ969F8 398 aaPredicted RBP5.7□□□□□ -1.5
TCN1-202ENST00000529251 SGSM3Q96HU1 749 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 TNFRSF12AQ9NP84 129 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 MRPS23Q9Y3D9 190 aaKnown RBP5.7□□□□□ -1.5
TCN1-202ENST00000529251 BACE2Q9Y5Z0 518 aa5.7□□□□□ -1.5
TCN1-202ENST00000529251 IQCA1LA6NCM1 817 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 FGF10O15520 208 aaPredicted RBP5.69□□□□□ -1.5
TCN1-202ENST00000529251 C6orf222P0C671 652 aaPredicted RBP5.69□□□□□ -1.5
TCN1-202ENST00000529251 PRKCAP17252 672 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 EPHB3P54753 998 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 GRB10Q13322 594 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 SSPNQ14714 243 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 SLC35F1Q5T1Q4 408 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 POMZP3Q6PJE2 187 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 FAM177A1Q8N128 213 aaPredicted RBP5.69□□□□□ -1.5
TCN1-202ENST00000529251 NPLOC4Q8TAT6 608 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 DHRS4Q9BTZ2 278 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 IRF2BPLQ9H1B7 796 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 CNTD2Q9H8S5 307 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 CYP26B1Q9NR63 512 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 TMEM260Q9NX78 707 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 KLHL14Q9P2G3 628 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 IMPACTQ9P2X3 320 aa5.69□□□□□ -1.5
TCN1-202ENST00000529251 PPARGC1AQ9UBK2 798 aaKnown RBP5.69□□□□□ -1.5
TCN1-202ENST00000529251 TMA7Q9Y2S6 64 aaKnown RBP5.69□□□□□ -1.5
TCN1-202ENST00000529251 CADPSQ9ULU8 1353 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 MSL3P1P0C860 447 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 FGFR1P11362 822 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 HOXC12P31275 282 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 SEPHS1P49903 392 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 MVKQ03426 396 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 PPIL6Q8IXY8 311 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 NUP43Q8NFH3 380 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 SLC7A14Q8TBB6 771 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 PTCHD1Q96NR3 888 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 BTG4Q9NY30 223 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 FBLN5Q9UBX5 448 aa5.68□□□□□ -1.5
TCN1-202ENST00000529251 CNOT6Q9ULM6 557 aaKnown RBP5.68□□□□□ -1.5
TCN1-202ENST00000529251 ABLIM1O14639 778 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 N4BP3O15049 544 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 MPOP05164 745 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 ARL4AP40617 200 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 NOP2P46087 812 aaKnown RBP5.67□□□□□ -1.5
TCN1-202ENST00000529251 CYP4F8P98187 520 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 CYP2R1Q6VVX0 501 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 TTLL10Q6ZVT0 673 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 FGD2Q7Z6J4 655 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 NAT16Q8N8M0 369 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 ZNF669Q96BR6 464 aaPredicted RBP5.67□□□□□ -1.5
TCN1-202ENST00000529251 SLC52A2Q9HAB3 445 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 EPB41L4AQ9HCS5 686 aaPredicted RBP5.67□□□□□ -1.5
TCN1-202ENST00000529251 SIRT5Q9NXA8 310 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 NDOR1Q9UHB4 597 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 KCTD3Q9Y597 815 aa5.67□□□□□ -1.5
TCN1-202ENST00000529251 IRS4O14654 1257 aaPredicted RBP5.66□□□□□ -1.5
TCN1-202ENST00000529251 CDC45O75419 566 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 SDSP20132 328 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 TACR1P25103 407 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 CDR1P51861 262 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 HLA-DQA1Q5Y7H0 255 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 EGFLAMQ63HQ2 1017 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 RPTNQ6XPR3 784 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 SCUBE1Q8IWY4 988 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 DHX37Q8IY37 1157 aaKnown RBP5.66□□□□□ -1.5
TCN1-202ENST00000529251 CRACR2BQ8N4Y2 399 aaPredicted RBP5.66□□□□□ -1.5
TCN1-202ENST00000529251 RCBTB1Q8NDN9 531 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 ZSWIM2Q8NEG5 633 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 PANK1Q8TE04 598 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 KCTD13Q8WZ19 329 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 DPF3Q92784 378 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 SIGLEC10Q96LC7 697 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 RXFP1Q9HBX9 757 aa5.66□□□□□ -1.5
TCN1-202ENST00000529251 GULP1Q9UBP9 304 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms