RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SYDE2Q5VT97 1194 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 BLOC1S2Q6QNY1 142 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 PLEKHH3Q7Z736 793 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 CATIPQ7Z7H3 387 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 SGMS1Q86VZ5 419 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 NCAPG2Q86XI2 1143 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 CPXCR1Q8N123 301 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 STAG2Q8N3U4 1231 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 FBXL16Q8N461 479 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 USP6NLQ92738 828 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 JAKMIP1Q96N16 626 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 TEX13BQ9BXU2 312 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 LRRC2Q9BYS8 371 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 TM6SF1Q9BZW5 370 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 RANBP17Q9H2T7 1088 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 RAVER2Q9HCJ3 691 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 MAD2L2Q9UI95 211 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 ISY1Q9ULR0 285 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 RIPK3Q9Y572 518 aa7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 CTDP1Q9Y5B0 961 aaPredicted RBP7.27□□□□□ -1.25
ATPAF1-209ENST00000529214 CCDC69A6NI79 296 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 SLC15A5A6NIM6 579 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 KLRF2D3W0D1 207 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 CPA1P15085 419 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 CASTP20810 708 aaKnown RBP7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 RPS6KB1P23443 525 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 COPB2P35606 906 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 ANP32AP39687 249 aaKnown RBP7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 SNAP25P60880 206 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 GRM4Q14833 912 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 SNRNP48Q6IEG0 339 aaKnown RBP7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 NFXL1Q6ZNB6 911 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 RUFY3Q7L099 469 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 ADGRF4Q8IZF3 695 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 ZNF654Q8IZM8 581 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 ABRAQ8N0Z2 381 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 RAET1EQ8TD07 263 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 IL17RAQ96F46 866 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 AGBL1Q96MI9 1066 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 TCEANC2Q96MN5 208 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 EPAS1Q99814 870 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 NUDT12Q9BQG2 462 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 AGXT2Q9BYV1 514 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 CPVLQ9H3G5 476 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 HPS5Q9UPZ3 1129 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 PTCH2Q9Y6C5 1203 aa7.26□□□□□ -1.25
ATPAF1-209ENST00000529214 NRDCO43847 1150 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 DDAH1O94760 285 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 ICAM1P05362 532 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 HOXC6P09630 235 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 CALM1P0DP23 149 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 CALM2P0DP24 149 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 CALM3P0DP25 149 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 FCER1AP12319 257 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 XRCC5P13010 732 aaKnown RBP7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 CYP2B6P20813 491 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 SMARCA1P28370 1054 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 MYBPC2Q14324 1141 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 GRB14Q14449 540 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 TKFCQ3LXA3 575 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 WDR78Q5VTH9 848 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 PRPF38BQ5VTL8 546 aaKnown RBP7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 SYNE3Q6ZMZ3 975 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 Q6ZUG5 572 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 APBB1IPQ7Z5R6 666 aaPredicted RBP7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 NME8Q8N427 588 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 FANCBQ8NB91 859 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 CHST13Q8NET6 341 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 NUP133Q8WUM0 1156 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 SOCS4Q8WXH5 440 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 MTMR8Q96EF0 704 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 ABHD8Q96I13 439 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 RIOX1Q9H6W3 641 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 JMJD4Q9H9V9 463 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 VAT1LQ9HCJ6 419 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 PNMA2Q9UL42 364 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 PPME1Q9Y570 386 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 SLC12A7Q9Y666 1083 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 CYP46A1Q9Y6A2 500 aa7.25□□□□□ -1.25
ATPAF1-209ENST00000529214 CYTH3O43739 400 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ADCY3O60266 1144 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 COBLO75128 1261 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 CD46P15529 392 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 NDUFV2P19404 249 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ADORA2AP29274 412 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 GRK4P32298 578 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 KIF5BP33176 963 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 PBX2P40425 430 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 RGS2P41220 211 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 SLC4A3P48751 1232 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 GNAQP50148 359 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 EVCP57679 992 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 TAGLNQ01995 201 aaKnown RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 SLC35G1Q2M3R5 365 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 CCDC174Q6PII3 467 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 APOA5Q6Q788 366 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 PADI6Q6TGC4 694 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 DPP9Q86TI2 863 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 OTUD6BQ8N6M0 293 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms