RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CCDC96Q2M329 555 aa22.48■■□□□ 1.19
SSRP1-204ENST00000529002 FAM117BQ6P1L5 589 aa22.48■■□□□ 1.19
SSRP1-204ENST00000529002 GJD3Q8N144 294 aa22.48■■□□□ 1.19
SSRP1-204ENST00000529002 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.48■■□□□ 1.19
SSRP1-204ENST00000529002 UIMC1Q96RL1 719 aa22.48■■□□□ 1.19
SSRP1-204ENST00000529002 ADD3Q9UEY8 706 aaKnown RBP22.48■■□□□ 1.19
SSRP1-204ENST00000529002 NOD1Q9Y239 953 aa22.48■■□□□ 1.19
SSRP1-204ENST00000529002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.47■■□□□ 1.19
SSRP1-204ENST00000529002 BAIAP3O94812 1187 aa22.47■■□□□ 1.19
SSRP1-204ENST00000529002 ARIH2O95376 493 aa22.47■■□□□ 1.19
SSRP1-204ENST00000529002 GNAT2P19087 354 aa22.47■■□□□ 1.19
SSRP1-204ENST00000529002 HNRNPUQ00839 825 aaKnown RBP eCLIP22.47■■□□□ 1.19
SSRP1-204ENST00000529002 CTDSPL2Q05D32 466 aa22.47■■□□□ 1.19
SSRP1-204ENST00000529002 PPP2R5BQ15173 497 aa22.47■■□□□ 1.19
SSRP1-204ENST00000529002 PTGISQ16647 500 aa22.47■■□□□ 1.19
SSRP1-204ENST00000529002 RANBP17Q9H2T7 1088 aaKnown RBP22.47■■□□□ 1.19
SSRP1-204ENST00000529002 A6NJR5 290 aa22.46■■□□□ 1.19
SSRP1-204ENST00000529002 PRR33A8MZF0 331 aa22.46■■□□□ 1.19
SSRP1-204ENST00000529002 SSTR3P32745 418 aaPredicted RBP22.46■■□□□ 1.19
SSRP1-204ENST00000529002 GDF6Q6KF10 455 aaPredicted RBP22.46■■□□□ 1.19
SSRP1-204ENST00000529002 DHX38Q92620 1227 aaKnown RBP22.46■■□□□ 1.19
SSRP1-204ENST00000529002 DDX19BQ9UMR2 479 aa22.46■■□□□ 1.19
SSRP1-204ENST00000529002 MYH7BA7E2Y1 1941 aa22.46■■□□□ 1.19
SSRP1-204ENST00000529002 LINC01553A4QN01 128 aa22.45■■□□□ 1.18
SSRP1-204ENST00000529002 MRE11P49959 708 aa22.45■■□□□ 1.18
SSRP1-204ENST00000529002 PDE4DQ08499 809 aa22.45■■□□□ 1.18
SSRP1-204ENST00000529002 CLEC4DQ8WXI8 215 aa22.45■■□□□ 1.18
SSRP1-204ENST00000529002 NAPBQ9H115 298 aa22.45■■□□□ 1.18
SSRP1-204ENST00000529002 LMCD1Q9NZU5 365 aa22.45■■□□□ 1.18
SSRP1-204ENST00000529002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.45■■□□□ 1.18
SSRP1-204ENST00000529002 TSPY2A6NKD2 308 aa22.44■■□□□ 1.18
SSRP1-204ENST00000529002 NBNO60934 754 aa22.44■■□□□ 1.18
SSRP1-204ENST00000529002 TXNP10599 105 aaKnown RBP22.44■■□□□ 1.18
SSRP1-204ENST00000529002 ERVK-21P61565 698 aa22.44■■□□□ 1.18
SSRP1-204ENST00000529002 PTPN11Q06124 597 aaPredicted RBP22.44■■□□□ 1.18
SSRP1-204ENST00000529002 LEXMQ3ZCV2 418 aa22.44■■□□□ 1.18
SSRP1-204ENST00000529002 BRDTQ58F21 947 aaPredicted RBP22.44■■□□□ 1.18
SSRP1-204ENST00000529002 FRMPD2Q68DX3 1309 aaPredicted RBP22.44■■□□□ 1.18
SSRP1-204ENST00000529002 GPCPD1Q9NPB8 672 aa22.44■■□□□ 1.18
SSRP1-204ENST00000529002 MICAL3Q7RTP6 2002 aa22.43■■□□□ 1.18
SSRP1-204ENST00000529002 KIAA1217Q5T5P2 1943 aa22.43■■□□□ 1.18
SSRP1-204ENST00000529002 GJB5O95377 273 aa22.43■■□□□ 1.18
SSRP1-204ENST00000529002 SYDE2Q5VT97 1194 aa22.43■■□□□ 1.18
SSRP1-204ENST00000529002 PTCRAQ6ISU1 281 aaPredicted RBP22.43■■□□□ 1.18
SSRP1-204ENST00000529002 SCFD2Q8WU76 684 aa22.43■■□□□ 1.18
SSRP1-204ENST00000529002 ANKS1AQ92625 1134 aa22.43■■□□□ 1.18
SSRP1-204ENST00000529002 TGS1Q96RS0 853 aaKnown RBP22.43■■□□□ 1.18
SSRP1-204ENST00000529002 NACAP1Q9BZK3 213 aa22.43■■□□□ 1.18
SSRP1-204ENST00000529002 RAD50Q92878 1312 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 FOXP2O15409 715 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 ZFYP08048 801 aaPredicted RBP22.42■■□□□ 1.18
SSRP1-204ENST00000529002 SLC3A2P08195 630 aaKnown RBP22.42■■□□□ 1.18
SSRP1-204ENST00000529002 SELPP16109 830 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 LRRFIP1Q32MZ4 808 aaKnown RBP22.42■■□□□ 1.18
SSRP1-204ENST00000529002 CNKSR3Q6P9H4 555 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 RNF207Q6ZRF8 634 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 LRRC8DQ7L1W4 858 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 AFAP1L1Q8TED9 768 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 AFG1LQ8WV93 481 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 C17orf80Q9BSJ5 609 aa22.42■■□□□ 1.18
SSRP1-204ENST00000529002 ZNF318Q5VUA4 2279 aa22.41■■□□□ 1.18
SSRP1-204ENST00000529002 NKRFO15226 690 aaKnown RBP eCLIP22.41■■□□□ 1.18
SSRP1-204ENST00000529002 KPNA6O60684 536 aa22.41■■□□□ 1.18
SSRP1-204ENST00000529002 EDNRBP24530 442 aa22.41■■□□□ 1.18
SSRP1-204ENST00000529002 RPS6P62753 249 aaKnown RBP22.41■■□□□ 1.18
SSRP1-204ENST00000529002 CAGE1Q8TC20 777 aa22.41■■□□□ 1.18
SSRP1-204ENST00000529002 KAT2BQ92831 832 aa22.41■■□□□ 1.18
SSRP1-204ENST00000529002 RAD9AQ99638 391 aa22.41■■□□□ 1.18
SSRP1-204ENST00000529002 ATG2AQ2TAZ0 1938 aa22.4■■□□□ 1.18
SSRP1-204ENST00000529002 H3BQ06 376 aaPredicted RBP22.4■■□□□ 1.18
SSRP1-204ENST00000529002 RANBP6O60518 1105 aaKnown RBP22.4■■□□□ 1.18
SSRP1-204ENST00000529002 BTNL9Q6UXG8 535 aa22.4■■□□□ 1.18
SSRP1-204ENST00000529002 CHST3Q7LGC8 479 aa22.4■■□□□ 1.18
SSRP1-204ENST00000529002 DCAF4Q8WV16 495 aa22.4■■□□□ 1.18
SSRP1-204ENST00000529002 WNT8BQ93098 351 aa22.4■■□□□ 1.18
SSRP1-204ENST00000529002 NLRC5Q86WI3 1866 aa22.4■■□□□ 1.18
SSRP1-204ENST00000529002 LOC102724159A0A0B4J2E5 919 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 GRXCR2A6NFK2 248 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 CXCL10P02778 98 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 MMP3P08254 477 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 CKBP12277 381 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 NHLH1Q02575 133 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 PWP2Q15269 919 aaKnown RBP22.39■■□□□ 1.17
SSRP1-204ENST00000529002 LY6KQ17RY6 165 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.39■■□□□ 1.17
SSRP1-204ENST00000529002 CCDC155Q8N6L0 562 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 FBXL18Q96ME1 805 aa22.39■■□□□ 1.17
SSRP1-204ENST00000529002 MS4A1P11836 297 aa22.38■■□□□ 1.17
SSRP1-204ENST00000529002 MBTPS1Q14703 1052 aa22.38■■□□□ 1.17
SSRP1-204ENST00000529002 CSPP1Q1MSJ5 1256 aa22.38■■□□□ 1.17
SSRP1-204ENST00000529002 FBXO22Q8NEZ5 403 aa22.38■■□□□ 1.17
SSRP1-204ENST00000529002 CRBNQ96SW2 442 aa22.38■■□□□ 1.17
SSRP1-204ENST00000529002 HDAC6Q9UBN7 1215 aa22.38■■□□□ 1.17
SSRP1-204ENST00000529002 NOVP48745 357 aa22.37■■□□□ 1.17
SSRP1-204ENST00000529002 ZNF200P98182 395 aaPredicted RBP22.37■■□□□ 1.17
SSRP1-204ENST00000529002 ARHGAP1Q07960 439 aa22.37■■□□□ 1.17
SSRP1-204ENST00000529002 ZMYM1Q5SVZ6 1142 aa22.37■■□□□ 1.17
SSRP1-204ENST00000529002 CCDC62Q6P9F0 684 aa22.37■■□□□ 1.17
SSRP1-204ENST00000529002 TRAF7Q6Q0C0 670 aa22.37■■□□□ 1.17
SSRP1-204ENST00000529002 SEPT14Q6ZU15 432 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms