RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 TBX21Q9UL17 535 aa16.9■□□□□ 0.3
PACS1-207ENST00000528935 PCDHA1Q9Y5I3 950 aa16.9■□□□□ 0.3
PACS1-207ENST00000528935 SLC27A2O14975 620 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 TLR3O15455 904 aaKnown RBP16.89■□□□□ 0.29
PACS1-207ENST00000528935 PPP1R11O60927 126 aaPredicted RBP16.89■□□□□ 0.29
PACS1-207ENST00000528935 TIMP1P01033 207 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 MCM5P33992 734 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 CPT1AP50416 773 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 GHRHRQ02643 423 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 ITGA7Q13683 1181 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 NECTIN1Q15223 517 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 SLC35G1Q2M3R5 365 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 PIGSQ96S52 555 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 RMDN3Q96TC7 470 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 LY9Q9HBG7 655 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 ANO2Q9NQ90 1003 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 POLR3EQ9NVU0 708 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 MAP3K20Q9NYL2 800 aaKnown RBP16.89■□□□□ 0.29
PACS1-207ENST00000528935 LAMA3Q16787 3333 aa16.89■□□□□ 0.29
PACS1-207ENST00000528935 OPLAHO14841 1288 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 PRC1O43663 620 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 CYTH3O43739 400 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 CFBP00751 764 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 CD4P01730 458 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 TXNP10599 105 aaKnown RBP16.88■□□□□ 0.29
PACS1-207ENST00000528935 HSD17B4P51659 736 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 FPGSQ05932 587 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 BECN1Q14457 450 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 TTLL4Q14679 1199 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 STXBP2Q15833 593 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 C9orf50Q5SZB4 431 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 ARHGEF16Q5VV41 709 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 CREB3L3Q68CJ9 461 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 HOMER1Q86YM7 354 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 TMTC2Q8N394 836 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 SAMD3Q8N6K7 520 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 GRIN2DO15399 1336 aa16.88■□□□□ 0.29
PACS1-207ENST00000528935 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
PACS1-207ENST00000528935 DDAH1O94760 285 aa16.87■□□□□ 0.29
PACS1-207ENST00000528935 BRDTQ58F21 947 aaPredicted RBP16.87■□□□□ 0.29
PACS1-207ENST00000528935 MFSD5Q6N075 450 aa16.87■□□□□ 0.29
PACS1-207ENST00000528935 ZNF654Q8IZM8 581 aa16.87■□□□□ 0.29
PACS1-207ENST00000528935 TMEM87BQ96K49 555 aa16.87■□□□□ 0.29
PACS1-207ENST00000528935 GPHNQ9NQX3 736 aaPredicted RBP16.87■□□□□ 0.29
PACS1-207ENST00000528935 MYH6P13533 1939 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 A6NJR5 290 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 KPNA6O60684 536 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 EIF3JO75822 258 aaKnown RBP16.86■□□□□ 0.29
PACS1-207ENST00000528935 ARIH2O95376 493 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 MYL3P08590 195 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 KIF5BP33176 963 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 EPHB4P54760 987 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 PSMC6P62333 389 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 PURAQ00577 322 aaKnown RBP16.86■□□□□ 0.29
PACS1-207ENST00000528935 CCDC62Q6P9F0 684 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 SEPT14Q6ZU15 432 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 DEFB123Q8N688 67 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 CTCFLQ8NI51 663 aaPredicted RBP16.86■□□□□ 0.29
PACS1-207ENST00000528935 COPS5Q92905 334 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 PXMP2Q9NR77 195 aa16.86■□□□□ 0.29
PACS1-207ENST00000528935 CCDC69A6NI79 296 aa16.85■□□□□ 0.29
PACS1-207ENST00000528935 SH2B2O14492 632 aaPredicted RBP16.85■□□□□ 0.29
PACS1-207ENST00000528935 NR3C2P08235 984 aa16.85■□□□□ 0.29
PACS1-207ENST00000528935 EIF2AK2P19525 551 aaKnown RBP16.85■□□□□ 0.29
PACS1-207ENST00000528935 SMARCA1P28370 1054 aa16.85■□□□□ 0.29
PACS1-207ENST00000528935 LIFRP42702 1097 aa16.85■□□□□ 0.29
PACS1-207ENST00000528935 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
PACS1-207ENST00000528935 NFXL1Q6ZNB6 911 aa16.85■□□□□ 0.29
PACS1-207ENST00000528935 LZTS2Q9BRK4 669 aa16.85■□□□□ 0.29
PACS1-207ENST00000528935 MTG1Q9BT17 334 aaPredicted RBP16.85■□□□□ 0.29
PACS1-207ENST00000528935 GCOM1H8Y6P7 765 aaPredicted RBP16.84■□□□□ 0.29
PACS1-207ENST00000528935 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
PACS1-207ENST00000528935 HOXA13P31271 388 aaPredicted RBP16.84■□□□□ 0.29
PACS1-207ENST00000528935 GNAQP50148 359 aa16.84■□□□□ 0.29
PACS1-207ENST00000528935 COL9A3Q14050 684 aaPredicted RBP16.84■□□□□ 0.29
PACS1-207ENST00000528935 FAM109BQ6ICB4 259 aaPredicted RBP16.84■□□□□ 0.29
PACS1-207ENST00000528935 Q7L0L9 218 aa16.84■□□□□ 0.29
PACS1-207ENST00000528935 TMEM199Q8N511 208 aa16.84■□□□□ 0.29
PACS1-207ENST00000528935 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
PACS1-207ENST00000528935 MYL10Q9BUA6 226 aa16.84■□□□□ 0.29
PACS1-207ENST00000528935 SPZ1Q9BXG8 430 aa16.84■□□□□ 0.29
PACS1-207ENST00000528935 PPP1R12CQ9BZL4 782 aa16.84■□□□□ 0.29
PACS1-207ENST00000528935 TRPV6Q9H1D0 765 aa16.84■□□□□ 0.29
PACS1-207ENST00000528935 B4GALT4O60513 344 aa16.83■□□□□ 0.28
PACS1-207ENST00000528935 REC8O95072 547 aa16.83■□□□□ 0.28
PACS1-207ENST00000528935 GH1P01241 217 aa16.83■□□□□ 0.28
PACS1-207ENST00000528935 CALM1P0DP23 149 aa16.83■□□□□ 0.28
PACS1-207ENST00000528935 CALM2P0DP24 149 aa16.83■□□□□ 0.28
PACS1-207ENST00000528935 CALM3P0DP25 149 aa16.83■□□□□ 0.28
PACS1-207ENST00000528935 PPIGQ13427 754 aaKnown RBP eCLIP16.83■□□□□ 0.285e-6■□□□□ 10.2
PACS1-207ENST00000528935 LY6KQ17RY6 165 aa16.83■□□□□ 0.28
PACS1-207ENST00000528935 RRP36Q96EU6 259 aaKnown RBP16.83■□□□□ 0.28
PACS1-207ENST00000528935 PDCD2LQ9BRP1 358 aa16.83■□□□□ 0.28
PACS1-207ENST00000528935 ALDH8A1Q9H2A2 487 aaPredicted RBP16.83■□□□□ 0.28
PACS1-207ENST00000528935 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.28
PACS1-207ENST00000528935 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
PACS1-207ENST00000528935 MYCLP12524 364 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms