RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 LIMA1Q9UHB6 759 aaKnown RBP15.2■□□□□ 0.02
SEC16B-208ENST00000528461 CDK11BP21127 795 aaKnown RBP15.2■□□□□ 0.02
SEC16B-208ENST00000528461 TRIM49BA6NDI0 452 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 MYMKA6NI61 221 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 HYIQ5T013 277 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 SPECC1LQ69YQ0 1117 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 SPIRE1Q08AE8 756 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 STK4Q13043 487 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 USH1GQ495M9 461 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 FAM83BQ5T0W9 1011 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 MOXD1Q6UVY6 613 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 CCDC125Q86Z20 511 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 RASSF8Q8NHQ8 419 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 ETNPPLQ8TBG4 499 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 KRT31Q15323 416 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 TTI2Q6NXR4 508 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 CNNM4Q6P4Q7 775 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 C16orf45Q96MC5 204 aaPredicted RBP15.19■□□□□ 0.02
SEC16B-208ENST00000528461 ARHGEF10LQ9HCE6 1279 aa15.19■□□□□ 0.02
SEC16B-208ENST00000528461 EHHADHQ08426 723 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 MCM6Q14566 821 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 DUSP9Q99956 384 aaKnown RBP15.18■□□□□ 0.02
SEC16B-208ENST00000528461 STK17AQ9UEE5 414 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 PIK3CDO00329 1044 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 FCER1AP12319 257 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 SREBF1P36956 1147 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 STAT2P52630 851 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 ARHGAP4P98171 946 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 COBLL1Q53SF7 1204 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 DNTTIP2Q5QJE6 756 aaKnown RBP15.18■□□□□ 0.02
SEC16B-208ENST00000528461 CCDC84Q86UT8 332 aaPredicted RBP15.18■□□□□ 0.02
SEC16B-208ENST00000528461 KIAA0895Q8NCT3 520 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 RAD54LQ92698 747 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 RANBP17Q9H2T7 1088 aaKnown RBP15.18■□□□□ 0.02
SEC16B-208ENST00000528461 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 ASTN2O75129 1339 aaPredicted RBP15.18■□□□□ 0.02
SEC16B-208ENST00000528461 FAM86B1E9PN63 330 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 PLA2G6O60733 806 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 FAM86B2P0C5J1 330 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 DHX8Q14562 1220 aaKnown RBP15.18■□□□□ 0.02
SEC16B-208ENST00000528461 CALML4Q96GE6 196 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 PRIMPOLQ96LW4 560 aa15.18■□□□□ 0.02
SEC16B-208ENST00000528461 LTBP3Q9NS15 1303 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 TMEM266Q2M3C6 531 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 Q4G0T1 1027 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 TCP11X2Q5H9J9 407 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 CEP135Q66GS9 1140 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 MYRIPQ8NFW9 859 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 TBC1D5Q92609 795 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 LARP4BQ92615 738 aaKnown RBP15.17■□□□□ 0.02
SEC16B-208ENST00000528461 HPS3Q969F9 1004 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 PCDHA12Q9UN75 941 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 RBBP6Q7Z6E9 1792 aaKnown RBP15.17■□□□□ 0.02
SEC16B-208ENST00000528461 TPM2P07951 284 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 CIITAP33076 1130 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 RASA3Q14644 834 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 SNX29Q8TEQ0 813 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 UIMC1Q96RL1 719 aa15.17■□□□□ 0.02
SEC16B-208ENST00000528461 PTGER2P43116 358 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 GOPCQ9HD26 462 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 TRMT1Q9NXH9 659 aaKnown RBP15.16■□□□□ 0.02
SEC16B-208ENST00000528461 H7C1D1 291 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 FZD9O00144 591 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 POLD1P28340 1107 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 HOXA13P31271 388 aaPredicted RBP15.16■□□□□ 0.02
SEC16B-208ENST00000528461 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
SEC16B-208ENST00000528461 ADKP55263 362 aaKnown RBP15.16■□□□□ 0.02
SEC16B-208ENST00000528461 SV2BQ7L1I2 683 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 JDP2Q8WYK2 163 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 DNAJC19Q96DA6 116 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 NAP1L4Q99733 375 aaKnown RBP15.16■□□□□ 0.02
SEC16B-208ENST00000528461 UQCRHLA0A096LP55 91 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
SEC16B-208ENST00000528461 UQCRHP07919 91 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 RASSF7Q02833 373 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 PDE4DQ08499 809 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 TPD52L1Q16890 204 aaPredicted RBP15.16■□□□□ 0.02
SEC16B-208ENST00000528461 GLIPR1L2Q4G1C9 344 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 PPP1R13BQ96KQ4 1090 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
SEC16B-208ENST00000528461 KCNJ18B7U540 433 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 CYP3A4P08684 503 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 TNNT1P13805 278 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 IKQ13123 557 aaPredicted RBP15.15■□□□□ 0.02
SEC16B-208ENST00000528461 KCNJ12Q14500 433 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 TNIP1Q15025 636 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 CYP2W1Q8TAV3 490 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 RAB34Q9BZG1 259 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 FBXO28Q9NVF7 368 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 CD2APQ9Y5K6 639 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 IGLV3-22A0A075B6J6 115 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.02
SEC16B-208ENST00000528461 COPB1P53618 953 aaKnown RBP15.15■□□□□ 0.02
SEC16B-208ENST00000528461 ASIC1P78348 528 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 KRT79Q5XKE5 535 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 MCTP2Q6DN12 878 aa15.15■□□□□ 0.02
SEC16B-208ENST00000528461 DHTKD1Q96HY7 919 aaPredicted RBP15.15■□□□□ 0.02
SEC16B-208ENST00000528461 PVALEFA0A1B0GWK0 134 aa15.14■□□□□ 0.01
SEC16B-208ENST00000528461 RNF225M0QZC1 329 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms