RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 ZNF543Q08ER8 600 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 TKFCQ3LXA3 575 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 SYDE2Q5VT97 1194 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 CCDC174Q6PII3 467 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 BTNL9Q6UXG8 535 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 SKAP1Q86WV1 359 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 ENAHQ8N8S7 591 aaPredicted RBP8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 ANKLE1Q8NAG6 615 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 MAML3Q96JK9 1138 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 TRERF1Q96PN7 1200 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 ACAD9Q9H845 621 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 ANO2Q9NQ90 1003 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 HOMER2Q9NSB8 354 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 FLRT1Q9NZU1 646 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 PNMA2Q9UL42 364 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 PCDHB3Q9Y5E6 796 aa8.39□□□□□ -1.07
PTP4A2-210ENST00000528253 IFIT3O14879 490 aaKnown RBP8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 MSCO60682 206 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 FARP2O94887 1054 aaPredicted RBP8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 ICAM1P05362 532 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 PARP1P09874 1014 aaKnown RBP8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 CCND3P30281 292 aaPredicted RBP8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 CYP2C19P33261 490 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 SLC16A2P36021 539 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 SNAP25P60880 206 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 ZNF792Q3KQV3 632 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 ASPRV1Q53RT3 343 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 TTBK2Q6IQ55 1244 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 TRAF7Q6Q0C0 670 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 CYB5R4Q7L1T6 521 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 DPF3Q92784 378 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 SHISA4Q96DD7 197 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 AGBL1Q96MI9 1066 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 TINF2Q9BSI4 451 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 HTATIP2Q9BUP3 242 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 LSG1Q9H089 658 aaKnown RBP8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 CCPG1Q9ULG6 757 aa8.38□□□□□ -1.07
PTP4A2-210ENST00000528253 PFASO15067 1338 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 ZNF536O15090 1300 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 SNHG28P0DPA3 235 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 MCM5P33992 734 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 WTAPQ15007 396 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 CREB3L3Q68CJ9 461 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 RASGRP2Q7LDG7 609 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 NECAB2Q7Z6G3 386 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 MSL3Q8N5Y2 521 aaKnown RBP8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 LRRN4Q8WUT4 740 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 USB1Q9BQ65 265 aaKnown RBP8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 UBA5Q9GZZ9 404 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 RANBP17Q9H2T7 1088 aaKnown RBP8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 RNF146Q9NTX7 359 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 NRBP1Q9UHY1 535 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 OGDHLQ9ULD0 1010 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 CNPY2Q9Y2B0 182 aa8.37□□□□□ -1.07
PTP4A2-210ENST00000528253 DNAJC25-GNG10A0A024R161 153 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 SLC27A2O14975 620 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 DHX16O60231 1041 aaKnown RBP8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 IGHA2P01877 340 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 GOLGA8HP0CJ92 632 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 CYBAP13498 195 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 NECTIN1Q15223 517 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 SEC23AQ15436 765 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 TMEM67Q5HYA8 995 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 PRAMEF19Q5SWL8 479 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 CHST3Q7LGC8 479 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 CATIPQ7Z7H3 387 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 TMTC2Q8N394 836 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 ARRDC4Q8NCT1 418 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 PAWRQ96IZ0 340 aaKnown RBP8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 MTA3Q9BTC8 594 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 VAT1LQ9HCJ6 419 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 DDX20Q9UHI6 824 aaKnown RBP8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 MYH7BA7E2Y1 1941 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 ALPK3Q96L96 1907 aa8.36□□□□□ -1.07
PTP4A2-210ENST00000528253 SYNGAP1Q96PV0 1343 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 LCTP09848 1927 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 ASB14A6NK59 587 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 KLRF2D3W0D1 207 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 SEPT4O43236 478 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 MUM1L1Q5H9M0 696 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 MAMDC4Q6UXC1 1216 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 NSMFQ6X4W1 530 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 NFXL1Q6ZNB6 911 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 NYAP1Q6ZVC0 841 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 STOX1Q6ZVD7 989 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 UBE2Q1Q7Z7E8 422 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 ADGRF4Q8IZF3 695 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 TRPV1Q8NER1 839 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 IGDCC4Q8TDY8 1250 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 TMEM87BQ96K49 555 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 CALR3Q96L12 384 aaKnown RBP8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 C11orf49Q9H6J7 331 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 A1CFQ9NQ94 594 aaKnown RBP8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 TAF6LQ9Y6J9 622 aa8.35□□□□□ -1.07
PTP4A2-210ENST00000528253 WDR19Q8NEZ3 1342 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 PTPDC1A2A3K4 754 aa8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
PTP4A2-210ENST00000528253 CCDC69A6NI79 296 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms