RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	MMP14	P50281	582 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	ADK	P55263	362 aa	Known RBP	11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	LRRC63	Q05C16	580 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	FIGN	Q5HY92	759 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	SLFN13	Q68D06	897 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	POTED	Q86YR6	584 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	SLFN12	Q8IYM2	578 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	GUF1	Q8N442	669 aa	Known RBP	11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	ZNF397	Q8NF99	534 aa	Predicted RBP	11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	MMTAG2	Q9BU76	263 aa	Known RBP	11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	CPVL	Q9H3G5	476 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	TMOD2	Q9NZR1	351 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	DDX25	Q9UHL0	483 aa	Known RBP	11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	GDA	Q9Y2T3	454 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	ADAMTSL1	Q8N6G6	1762 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	BRCA1	P38398	1863 aa	Known RBP	11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	UTRN	P46939	3433 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	GYPC	P04921	128 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	TXK	P42681	527 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	UBXN1	Q04323	297 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	ICA1	Q05084	483 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	HSP90AA4P	Q58FG1	418 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	FKBP1C	Q5VVH2	108 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	CENPP	Q6IPU0	288 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	BTNL9	Q6UXG8	535 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	CSGALNACT2	Q8N6G5	542 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	MB21D1	Q8N884	522 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	RAD54L	Q92698	747 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	COA7	Q96BR5	231 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	PSMD1	Q99460	953 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	DBNDD1	Q9H9R9	158 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	FAM198A	Q9UFP1	575 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	ZNF215	Q9UL58	517 aa	Predicted RBP	11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	ADGRG1	Q9Y653	693 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	KIF5C	O60282	957 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	EEF2	P13639	858 aa	Known RBP	11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	LMNB1	P20700	586 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	TNNI2	P48788	182 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	RBM5	P52756	815 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	NFIA	Q12857	509 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	GRB10	Q13322	594 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	ABCB5	Q2M3G0	1257 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	C9orf131	Q5VYM1	1079 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	ZNF662	Q6ZS27	426 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	IRF2BP1	Q8IU81	584 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	KIAA0825	Q8IV33	1275 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	OR8K1	Q8NGG5	319 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	AMN	Q9BXJ7	453 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	VPS16	Q9H269	839 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	ABHD10	Q9NUJ1	306 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	TMEM260	Q9NX78	707 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	TAB2	Q9NYJ8	693 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216	RNF181	Q9P0P0	153 aa		11.41	□□□□□ -0.58
PGAP2-231	ENST00000528216		A0A1W2PQJ5	194 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	EFCAB8	A8MWE9	144 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	USP17L10	C9JJH3	530 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	PPIP5K2	O43314	1243 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	MARCH6	O60337	910 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	CASP14	P31944	242 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	CCT6A	P40227	531 aa	Known RBP	11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	PRELP	P51888	382 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	GNG11	P61952	73 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	RBM26	Q5T8P6	1007 aa	Known RBP	11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	LARGE2	Q8N3Y3	721 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	ERMN	Q8TAM6	284 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	ZNF507	Q8TCN5	953 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	SNX29	Q8TEQ0	813 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	NUP88	Q99567	741 aa	Predicted RBP	11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	TSG101	Q99816	390 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	DNAJC18	Q9H819	358 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	BLOC1S4	Q9NUP1	217 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	HDAC9	Q9UKV0	1011 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	CAPN11	Q9UMQ6	739 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	PCDHA12	Q9UN75	941 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	LUC7L2	Q9Y383	392 aa	Known RBP	11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	SCN9A	Q15858	1988 aa		11.4	□□□□□ -0.58
PGAP2-231	ENST00000528216	LTBP3	Q9NS15	1303 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	PPP1R11	O60927	126 aa	Predicted RBP	11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	EIF6	P56537	245 aa	Known RBP	11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	CDK17	Q00537	523 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	ATP2B2	Q01814	1243 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	CDC37	Q16543	378 aa	Predicted RBP	11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	AOC3	Q16853	763 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	QRICH1	Q2TAL8	776 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	FKBP15	Q5T1M5	1219 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	HAUS3	Q68CZ6	603 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	CCDC84	Q86UT8	332 aa	Predicted RBP	11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	MNS1	Q8NEH6	495 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	FAM20A	Q96MK3	541 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	PNMA5	Q96PV4	448 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	ERGIC2	Q96RQ1	377 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	DNAJC7	Q99615	494 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	MXD3	Q9BW11	206 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	EDEM3	Q9BZQ6	932 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	KCNMB3	Q9NPA1	279 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	PCDHA1	Q9Y5I3	950 aa		11.39	□□□□□ -0.59
PGAP2-231	ENST00000528216	MYH7B	A7E2Y1	1941 aa		11.39	□□□□□ -0.59

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