RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 RBM46Q8TBY0 533 aaKnown RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 BRF1Q92994 677 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 IQCDQ96DY2 449 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 COQ7Q99807 217 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 ING2Q9H160 280 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 NARFQ9UHQ1 456 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 SOS1Q07889 1333 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 RNF123Q5XPI4 1314 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 TRIM16O95361 564 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 CALML3P27482 149 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 DNM1Q05193 864 aaKnown RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 TBC1D10BQ4KMP7 808 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 HIBCHQ6NVY1 386 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 CEP85Q6P2H3 762 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 STX19Q8N4C7 294 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 RSAD2Q8WXG1 361 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.88□□□□□ -1.153e-6■■■■■ 50.8
CTNND1-216ENST00000527467 GDAP1L1Q96MZ0 367 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 KCNH4Q9UQ05 1017 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 SAR1BQ9Y6B6 198 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 ALKQ9UM73 1620 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 CPSF1Q10570 1443 aaKnown RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 THAP12O43422 761 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 PRDM1O75626 825 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 OSBPP22059 807 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 IFNA8P32881 189 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 ST13P50502 369 aaKnown RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 BSPRYQ5W0U4 402 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 BBOF1Q8ND07 529 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 HTATIP2Q9BUP3 242 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 C10orf88Q9H8K7 445 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 SLC13A4Q9UKG4 626 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 ZC3H4Q9UPT8 1303 aaKnown RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 NVLO15381 856 aaKnown RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 PDE6AP16499 860 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 RTN1Q16799 776 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 ACBD5Q5T8D3 534 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 RAB44Q7Z6P3 723 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-216ENST00000527467 TBC1D32Q96NH3 1257 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 TEX12Q9BXU0 123 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 KRT23Q9C075 422 aa7.88□□□□□ -1.15
CTNND1-216ENST00000527467 NBPF26B4DH59 902 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 H3BRJ5 948 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ATP8B1O43520 1251 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 WDR47O94967 919 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 BMP2KLQ5H9B9 411 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 CDC37L1Q7L3B6 337 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 TRIM59Q8IWR1 403 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ENOX1Q8TC92 643 aaKnown RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 CDKL2Q92772 493 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 TRIM63Q969Q1 353 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 CCDC85AQ96PX6 553 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 USTQ9Y2C2 406 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ATRNO75882 1429 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 TADA3O75528 432 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ZNF157P51786 506 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 SMTNP53814 917 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 SLC44A4Q53GD3 710 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 LDHDQ86WU2 507 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 DNAJC10Q8IXB1 793 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 TSC1Q92574 1164 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ATP6V0A4Q9HBG4 840 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 STX18Q9P2W9 335 aaKnown RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ARHGAP26Q9UNA1 814 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 NWD1Q149M9 1564 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 UNC13BO14795 1591 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ESRRBO95718 433 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 S100A9P06702 114 aaKnown RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 SLFN14P0C7P3 912 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 C4BPBP20851 252 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 GNL1P36915 607 aaPredicted RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 MAP3K10Q02779 954 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ART3Q13508 389 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 KHDRBS2Q5VWX1 349 aaKnown RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 CAPRIN2Q6IMN6 1127 aaKnown RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 WDR75Q8IWA0 830 aaKnown RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 RUNDC3BQ96NL0 473 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 MYD88Q99836 296 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 SYTL2Q9HCH5 934 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ECHDC1Q9NTX5 307 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 TTI1O43156 1089 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 GRK2P25098 689 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ADCY8P40145 1251 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 NBPF9Q3BBW0 867 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 TBC1D9Q6ZT07 1266 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 ARMCX6Q7L4S7 300 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 STAMBPL1Q96FJ0 436 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 NAF1Q96HR8 494 aaKnown RBP7.87□□□□□ -1.15
CTNND1-216ENST00000527467 TBC1D23Q9NUY8 699 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 AMFRQ9UKV5 643 aa7.87□□□□□ -1.15
CTNND1-216ENST00000527467 RASSF10A6NK89 507 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 EFCAB8A8MWE9 144 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 NAPAP54920 295 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 TEDDM1Q5T9Z0 273 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 ANKRD13DQ6ZTN6 518 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 HORMAD1Q86X24 394 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 OMA1Q96E52 524 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 CNBD2Q96M20 576 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms