RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 FHOD1Q9Y613 1164 aa4.79□□□□□ -1.64
CLNS1A-209ENST00000527299 MROH6A6NGR9 719 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 SUPT5HO00267 1087 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 CLGNO14967 610 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 ZBTB7AO95365 584 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 TPM2P07951 284 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 RPL13P26373 211 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 ANP32AP39687 249 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 ZNF165P49910 485 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 PMS1P54277 932 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 CRB2Q5IJ48 1285 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 NOL9Q5SY16 702 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 DCAF15Q66K64 600 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 CNPY4Q8N129 248 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 ANP32BQ92688 251 aaKnown RBP4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 SMARCC1Q92922 1105 aaPredicted RBP4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 BRF1Q92994 677 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 GORASP1Q9BQQ3 440 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 PCED1AQ9H1Q7 454 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 UBP1Q9NZI7 540 aa4.78□□□□□ -1.64
CLNS1A-209ENST00000527299 ZNF536O15090 1300 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 CLSTN1O94985 981 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 PTMAP06454 111 aaKnown RBP4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 CYP2C8P10632 490 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 CD247P20963 164 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 MCM4P33991 863 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 THBS2P35442 1172 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 IRX6P78412 446 aaPredicted RBP4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 ICAM4Q14773 271 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 AXDND1Q5T1B0 1012 aaPredicted RBP4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 BORAQ6PGQ7 559 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 USP51Q70EK9 711 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 FBXO33Q7Z6M2 555 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 FAM124AQ86V42 546 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 PPFIBP1Q86W92 1011 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 SLITRK4Q8IW52 837 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 FIBCD1Q8N539 461 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 LZTR1Q8N653 840 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 MAP7D2Q96T17 732 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 C11orf84Q9BUA3 381 aaPredicted RBP4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 TMEM51Q9NW97 253 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 VTI1BQ9UEU0 232 aa4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 SF3B6Q9Y3B4 125 aaKnown RBP4.77□□□□□ -1.65
CLNS1A-209ENST00000527299 FAM86C2PA6NEL3 165 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 PPP1R11O60927 126 aaPredicted RBP4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 C8BP07358 591 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 CD3EP07766 207 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 MCCP23508 829 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 ITGAEP38570 1179 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 POU4F1Q01851 419 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 APOBRQ0VD83 1088 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 TDRD10Q5VZ19 366 aaKnown RBP4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 RCSD1Q6JBY9 416 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 KYQ8NBH2 561 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 ZNF830Q96NB3 372 aaPredicted RBP4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 CDK5RAP1Q96SZ6 601 aaKnown RBP4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 POLR3GLQ9BT43 218 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 MTA3Q9BTC8 594 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 KLC2Q9H0B6 622 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 VPS11Q9H270 941 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 PCDH18Q9HCL0 1135 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 CD248Q9HCU0 757 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 MRS2Q9HD23 443 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 ADAMTS1Q9UHI8 967 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 RWDD3Q9Y3V2 267 aa4.76□□□□□ -1.65
CLNS1A-209ENST00000527299 A0A087WZG4 1122 aa4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 SURF1Q15526 300 aa4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 PRR31Q5SQ13 230 aa4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 C9orf131Q5VYM1 1079 aa4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 EEF1DP3Q658K8 133 aa4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 MCTP2Q6DN12 878 aa4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 TXNDC5Q8NBS9 432 aaKnown RBP4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 ZNF622Q969S3 477 aaKnown RBP eCLIP4.75□□□□□ -1.652e-18■□□□□ 10.6
CLNS1A-209ENST00000527299 PUS7Q96PZ0 661 aaKnown RBP4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 SYT3Q9BQG1 590 aa4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 PNNQ9H307 717 aaKnown RBP4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 PPP4R1LQ9P1A2 415 aa4.75□□□□□ -1.65
CLNS1A-209ENST00000527299 LAMTOR5O43504 91 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 AMHP03971 560 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 PTMSP20962 102 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 IRX3P78415 501 aaPredicted RBP4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 TAF3Q5VWG9 929 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 WWC2Q6AWC2 1192 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 TAB3Q8N5C8 712 aaPredicted RBP4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 DNERQ8NFT8 737 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 NKD1Q969G9 470 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 MCMBPQ9BTE3 642 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 NT5C1AQ9BXI3 368 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 NOL6Q9H6R4 1146 aaKnown RBP4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 KCNG1Q9UIX4 513 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 ZNF451Q9Y4E5 1061 aa4.74□□□□□ -1.65
CLNS1A-209ENST00000527299 AURKAO14965 403 aa4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 B4GALT3O60512 393 aa4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 ITGA4P13612 1032 aa4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 FAM193AP78312 1265 aa4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 DNAJC14Q6Y2X3 702 aaPredicted RBP4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 TTLL6Q8N841 843 aa4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 LCORQ96JN0 433 aaPredicted RBP4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 RRAGDQ9NQL2 400 aaPredicted RBP4.73□□□□□ -1.65
CLNS1A-209ENST00000527299 GULP1Q9UBP9 304 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms