RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 Q9Y3F1 56 aa16.6■□□□□ 0.25
NXF1-204ENST00000527064 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
NXF1-204ENST00000527064 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 MOXD2PA6NHM9 499 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 ADCY6O43306 1168 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 EVI5O60447 810 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 C6orf222P0C671 652 aaPredicted RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 EIF2AK2P19525 551 aaKnown RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 CST5P28325 142 aaPredicted RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 CDC27P30260 824 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 GJA9P57773 515 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 FUT2Q10981 343 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 TOB2Q14106 344 aaPredicted RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 C8orf34Q49A92 452 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 PPP1R18Q6NYC8 613 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 TLK2Q86UE8 772 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 TEX2Q8IWB9 1127 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 PCSK9Q8NBP7 692 aaKnown RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 SMARCC2Q8TAQ2 1214 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 IL17RAQ96F46 866 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 WDR11Q9BZH6 1224 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 AP5M1Q9H0R1 490 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 FAM217BQ9NTX9 383 aaPredicted RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 PHF24Q9UPV7 400 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 GNEQ9Y223 722 aaKnown RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 NR2E3Q9Y5X4 410 aa16.59■□□□□ 0.25
NXF1-204ENST00000527064 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
NXF1-204ENST00000527064 hCG_1642624A0A1W2PR95 340 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 RBM47A0AV96 593 aaKnown RBP16.58■□□□□ 0.24
NXF1-204ENST00000527064 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
NXF1-204ENST00000527064 SMPD1P17405 629 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 PDIA3P30101 505 aaKnown RBP16.58■□□□□ 0.24
NXF1-204ENST00000527064 ADD1P35611 737 aaKnown RBP16.58■□□□□ 0.24
NXF1-204ENST00000527064 TTLL4Q14679 1199 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 ANKRD1Q15327 319 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 DUSP28Q4G0W2 176 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 FCHSD1Q86WN1 690 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 KLHDC9Q8NEP7 349 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 ZNF274Q96GC6 653 aaPredicted RBP16.58■□□□□ 0.24
NXF1-204ENST00000527064 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 PDGFCQ9NRA1 345 aa16.58■□□□□ 0.24
NXF1-204ENST00000527064 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.24
NXF1-204ENST00000527064 FRMPD4Q14CM0 1322 aa16.57■□□□□ 0.24
NXF1-204ENST00000527064 ZEB2O60315 1214 aa16.57■□□□□ 0.24
NXF1-204ENST00000527064 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
NXF1-204ENST00000527064 NR3C2P08235 984 aa16.57■□□□□ 0.24
NXF1-204ENST00000527064 CCND2P30279 289 aa16.57■□□□□ 0.24
NXF1-204ENST00000527064 NAPAP54920 295 aa16.57■□□□□ 0.24
NXF1-204ENST00000527064 NKX3-2P78367 333 aa16.57■□□□□ 0.24
NXF1-204ENST00000527064 AKAP17AQ02040 695 aaKnown RBP16.57■□□□□ 0.24
NXF1-204ENST00000527064 WWC2Q6AWC2 1192 aa16.57■□□□□ 0.24
NXF1-204ENST00000527064 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
NXF1-204ENST00000527064 GLT8D2Q9H1C3 349 aa16.57■□□□□ 0.24
NXF1-204ENST00000527064 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
NXF1-204ENST00000527064 A0A1W2PQ45 241 aaPredicted RBP16.56■□□□□ 0.24
NXF1-204ENST00000527064 A0A1W2PQY0 241 aa16.56■□□□□ 0.24
NXF1-204ENST00000527064 SEC24BO95487 1268 aa16.56■□□□□ 0.24
NXF1-204ENST00000527064 PGM5Q15124 567 aa16.56■□□□□ 0.24
NXF1-204ENST00000527064 KCNA10Q16322 511 aa16.56■□□□□ 0.24
NXF1-204ENST00000527064 FSCN1Q16658 493 aaKnown RBP16.56■□□□□ 0.24
NXF1-204ENST00000527064 PFKFB3Q16875 520 aaPredicted RBP16.56■□□□□ 0.24
NXF1-204ENST00000527064 GNASQ5JWF2 1037 aa16.56■□□□□ 0.24
NXF1-204ENST00000527064 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
NXF1-204ENST00000527064 CCDC12Q8WUD4 166 aaPredicted RBP16.56■□□□□ 0.24
NXF1-204ENST00000527064 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
NXF1-204ENST00000527064 MYADML2A6NDP7 307 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 MEIS2O14770 477 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 CPLX1O14810 134 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 DYNC1LI2O43237 492 aaPredicted RBP16.55■□□□□ 0.24
NXF1-204ENST00000527064 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
NXF1-204ENST00000527064 STAM2O75886 525 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 TXNP10599 105 aaKnown RBP16.55■□□□□ 0.24
NXF1-204ENST00000527064 MYCLP12524 364 aaPredicted RBP16.55■□□□□ 0.24
NXF1-204ENST00000527064 SCG2P13521 617 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 IFNAR1P17181 557 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 CPT1AP50416 773 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 ACLYP53396 1101 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
NXF1-204ENST00000527064 LRRC26Q2I0M4 334 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 BRDTQ58F21 947 aaPredicted RBP16.55■□□□□ 0.24
NXF1-204ENST00000527064 CCSAPQ6IQ19 270 aaPredicted RBP16.55■□□□□ 0.24
NXF1-204ENST00000527064 KCNV1Q6PIU1 500 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 USP17L6PQ6QN14 398 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 SEPT14Q6ZU15 432 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 TRIM22Q8IYM9 498 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 C7orf61Q8IZ16 206 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 GLT1D1Q96MS3 346 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 RNF26Q9BY78 433 aaPredicted RBP16.55■□□□□ 0.24
NXF1-204ENST00000527064 EHMT1Q9H9B1 1298 aa16.55■□□□□ 0.24
NXF1-204ENST00000527064 SPDYE3A6NKU9 549 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 STXBP3O00186 592 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 ASGR1P07306 291 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 ADCY7P51828 1080 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 ATN1P54259 1190 aaPredicted RBP16.54■□□□□ 0.24
NXF1-204ENST00000527064 SNX17Q15036 470 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 GNPTABQ3T906 1256 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 C1orf53Q5VUE5 145 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 XRRA1Q6P2D8 792 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms