RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ANO1Q5XXA6 986 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 TTBK2Q6IQ55 1244 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 MAMDC4Q6UXC1 1216 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 C7orf61Q8IZ16 206 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 MSL3Q8N5Y2 521 aaKnown RBP14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 PIBF1Q8WXW3 757 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 TNPO1Q92973 898 aaKnown RBP14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 AGBL1Q96MI9 1066 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 FBXO40Q9UH90 709 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 PRR12Q9ULL5 1215 aa14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 CTDP1Q9Y5B0 961 aaPredicted RBP14.57□□□□□ -0.08
SSSCA1-203ENST00000526877 SLC16A2P36021 539 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 GJC2Q5T442 439 aaPredicted RBP14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 SYDE2Q5VT97 1194 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 KRT40Q6A162 431 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 MCTP1Q6DN14 999 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 BTNL9Q6UXG8 535 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 ZNF467Q7Z7K2 595 aaPredicted RBP14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 HOMER1Q86YM7 354 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 ADGRF4Q8IZF3 695 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 FAM177A1Q8N128 213 aaPredicted RBP14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 ARRDC4Q8NCT1 418 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 AIFM3Q96NN9 605 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 GBP4Q96PP9 640 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 PIGSQ96S52 555 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 GDF15Q99988 308 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 SENP6Q9GZR1 1112 aaPredicted RBP14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 CPVLQ9H3G5 476 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 ZSCAN16Q9H4T2 348 aaPredicted RBP14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 JMJD4Q9H9V9 463 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 SH3GLB2Q9NR46 395 aa14.56□□□□□ -0.08
SSSCA1-203ENST00000526877 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 hCG_1984214I3L0E3 225 aa14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 SNAP25P60880 206 aa14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 GNL2Q13823 731 aaKnown RBP14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 LRRC41Q15345 812 aa14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 SLC35G1Q2M3R5 365 aa14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 ANKRD35Q8N283 1001 aa14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 ZNF713Q8N859 430 aaPredicted RBP14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 CCDC12Q8WUD4 166 aaPredicted RBP14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 ZMYND8Q9ULU4 1186 aaPredicted RBP14.55□□□□□ -0.08
SSSCA1-203ENST00000526877 DNAH12Q6ZR08 3092 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 ZBTB5O15062 677 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 TKFCQ3LXA3 575 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 HEATR3Q7Z4Q2 680 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 FERMT3Q86UX7 667 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 FAM133AQ8N9E0 248 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 CCDC148Q8NFR7 591 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 RANBP17Q9H2T7 1088 aaKnown RBP14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 ACAD9Q9H845 621 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 HOMER2Q9NSB8 354 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 VPS54Q9P1Q0 977 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 SYNGAP1Q96PV0 1343 aa14.54□□□□□ -0.08
SSSCA1-203ENST00000526877 MMP1P03956 469 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 SYN1P17600 705 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 CALML3P27482 149 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 BMP8BP34820 402 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 NLRP5P59047 1200 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 CNTN2Q02246 1040 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 TRAF1Q13077 416 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 MUM1L1Q5H9M0 696 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 CCDC174Q6PII3 467 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 MTMR8Q96EF0 704 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 GJB4Q9NTQ9 266 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 BARHL2Q9NY43 387 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 KCNJ14Q9UNX9 436 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 CNPY2Q9Y2B0 182 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 TCHHQ07283 1943 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 MYH15Q9Y2K3 1946 aa14.53□□□□□ -0.08
SSSCA1-203ENST00000526877 SOWAHBA6NEL2 793 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 ICAM1P05362 532 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 RARBP10826 455 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 ALAS1P13196 640 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 AKR1A1P14550 325 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 ADCYAP1R1P41586 468 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 ATN1P54259 1190 aaPredicted RBP14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 NAPAP54920 295 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 RESTQ13127 1097 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 CDC37Q16543 378 aaPredicted RBP14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 WWC2Q6AWC2 1192 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 GALNT17Q6IS24 598 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 SLC39A5Q6ZMH5 540 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 CLEC17AQ6ZS10 378 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 BRAPQ7Z569 592 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 GPKOWQ92917 476 aaPredicted RBP eCLIP14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 PHF20Q9BVI0 1012 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 KATNBL1Q9H079 304 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 XPNPEP3Q9NQH7 507 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 PCDH10Q9P2E7 1040 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 LCTP09848 1927 aa14.52□□□□□ -0.09
SSSCA1-203ENST00000526877 ASTN1O14525 1302 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 A0A1W2PPC1 479 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 KBTBD13C9JR72 458 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 GOLGA6L22H0YM25 854 aa14.51□□□□□ -0.09
SSSCA1-203ENST00000526877 STXBP3O00186 592 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms