RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 STXBP3O00186 592 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 PRPF3O43395 683 aaKnown RBP6.16□□□□□ -1.42
CTR9-203ENST00000526874 USP2O75604 605 aaPredicted RBP6.16□□□□□ -1.42
CTR9-203ENST00000526874 KCNH1O95259 989 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 RASGRP1O95267 797 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 GSNP06396 782 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 ZGLP1P0C6A0 271 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 VAV1P15498 845 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 BMP8BP34820 402 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 GALK1P51570 392 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 IRAK1P51617 712 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 SLC4A10Q6U841 1118 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 CBLL1Q75N03 491 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 CHPFQ8IZ52 775 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 LINC00116Q8NCU8 138 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 MFSD3Q96ES6 412 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 C19orf44Q9H6X5 657 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 PPCSQ9HAB8 311 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 TAGLN3Q9UI15 199 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 CTNND2Q9UQB3 1225 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 AKT3Q9Y243 479 aa6.16□□□□□ -1.42
CTR9-203ENST00000526874 GPR55Q9Y2T6 319 aaPredicted RBP6.16□□□□□ -1.42
CTR9-203ENST00000526874 ZNF205O95201 554 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 GUCY2FP51841 1108 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 RAPGEF1Q13905 1077 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 INO80DQ53TQ3 878 aaPredicted RBP6.15□□□□□ -1.42
CTR9-203ENST00000526874 RTP2Q5QGT7 225 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 FYB2Q5VWT5 728 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 RNF111Q6ZNA4 994 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 RNF180Q86T96 592 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 NIM1KQ8IY84 436 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 E2F7Q96AV8 911 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 SLC12A9Q9BXP2 914 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 RTFDC1Q9BY42 306 aaPredicted RBP6.15□□□□□ -1.42
CTR9-203ENST00000526874 PRR13Q9NZ81 148 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 LRP2BPQ9P2M1 347 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 MCM8Q9UJA3 840 aa6.15□□□□□ -1.42
CTR9-203ENST00000526874 SF3B6Q9Y3B4 125 aaKnown RBP6.15□□□□□ -1.42
CTR9-203ENST00000526874 TBX3O15119 743 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 PDE8AO60658 829 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 FAM163BP0C2L3 166 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 TAL1P17542 331 aaPredicted RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 ZEB1P37275 1124 aaPredicted RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 CBX2Q14781 532 aaPredicted RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 TMEM95Q3KNT9 176 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 SLC10A6Q3KNW5 377 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 TIGD5Q53EQ6 642 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 CT47A1Q5JQC4 288 aaPredicted RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 SYNPOQ8N3V7 929 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 BVESQ8NE79 360 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 NINJ1Q92982 152 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 SYTL4Q96C24 671 aaPredicted RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 FCRL3Q96P31 734 aaPredicted RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 G6PC3Q9BUM1 346 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 PCGF6Q9BYE7 350 aa6.14□□□□□ -1.43
CTR9-203ENST00000526874 INO80BQ9C086 356 aaPredicted RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 NOB1Q9ULX3 412 aaKnown RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 MRPS23Q9Y3D9 190 aaKnown RBP6.14□□□□□ -1.43
CTR9-203ENST00000526874 PAPLNO95428 1278 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 EFEMP2O95967 443 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 ITGAVP06756 1048 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 NEK2P51955 445 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 POU4F1Q01851 419 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 SSRP1Q08945 709 aaKnown RBP6.13□□□□□ -1.43
CTR9-203ENST00000526874 HLTFQ14527 1009 aaKnown RBP eCLIP6.13□□□□□ -1.43
CTR9-203ENST00000526874 KIR3DS1Q14943 382 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 GRAMD1BQ3KR37 738 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 ACBD5Q5T8D3 534 aaPredicted RBP6.13□□□□□ -1.43
CTR9-203ENST00000526874 EFCAB2Q5VUJ9 269 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 ERAP2Q6P179 960 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 EEPD1Q7L9B9 569 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 ZNF227Q86WZ6 799 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 ARHGEF39Q8N4T4 335 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 AFAP1L2Q8N4X5 818 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 BTN2A2Q8WVV5 523 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 SMAD5Q99717 465 aaKnown RBP6.13□□□□□ -1.43
CTR9-203ENST00000526874 PAGR1Q9BTK6 254 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 ERVK13-1Q9NX77 482 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 LZTS1Q9Y250 596 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 DIS3Q9Y2L1 958 aaKnown RBP6.13□□□□□ -1.43
CTR9-203ENST00000526874 EMC9Q9Y3B6 208 aa6.13□□□□□ -1.43
CTR9-203ENST00000526874 A0A087WZG4 1122 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 GSG1L2A8MUP6 293 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 NAT2P11245 290 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 GDNFP39905 211 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 CEBPAP49715 358 aaPredicted RBP6.12□□□□□ -1.43
CTR9-203ENST00000526874 AMPD2Q01433 879 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 MAPRE1Q15691 268 aaKnown RBP6.12□□□□□ -1.43
CTR9-203ENST00000526874 ZNF280DQ6N043 979 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 CEP128Q6ZU80 1094 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 STRA8Q7Z7C7 330 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 SIRT2Q8IXJ6 389 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 IFNL3Q8IZI9 196 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 SPICE1Q8N0Z3 855 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 NAT16Q8N8M0 369 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 MYRIPQ8NFW9 859 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 ATL2Q8NHH9 583 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 MAP6Q96JE9 813 aa6.12□□□□□ -1.43
CTR9-203ENST00000526874 HHIPL1Q96JK4 782 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms