RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 ARHGAP6O43182 974 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 PPP1R2P41236 205 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 GOLGA8FQ08AF8 430 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 GOLGA8DPQ0D2H9 430 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 STIM1Q13586 685 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 TTI2Q6NXR4 508 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 CCDC47Q96A33 483 aaKnown RBP17.87■□□□□ 0.45
USH1C-204ENST00000526313 ARHGEF10LQ9HCE6 1279 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 ZBTB21Q9ULJ3 1066 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 MAPK8IP1Q9UQF2 711 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 PVALEFA0A1B0GWK0 134 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 PSMA7O14818 248 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 COBLO75128 1261 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 TUBB4AP04350 444 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 HOXA7P31268 230 aaPredicted RBP17.86■□□□□ 0.45
USH1C-204ENST00000526313 COPB1P53618 953 aaKnown RBP17.86■□□□□ 0.45
USH1C-204ENST00000526313 PMS1P54277 932 aaKnown RBP17.86■□□□□ 0.45
USH1C-204ENST00000526313 KRT79Q5XKE5 535 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 LARP4BQ92615 738 aaKnown RBP17.86■□□□□ 0.45
USH1C-204ENST00000526313 RAD54LQ92698 747 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 PANX2Q96RD6 677 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 THAP9Q9H5L6 903 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 PRR12Q9ULL5 1215 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 KCNJ18B7U540 433 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 OPLAHO14841 1288 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 CCP110O43303 1012 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 FOSP01100 380 aaPredicted RBP17.86■□□□□ 0.45
USH1C-204ENST00000526313 ECE1P42892 770 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 KCNJ12Q14500 433 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 KIAA1755Q5JYT7 1200 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 ACER1Q8TDN7 264 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 NOC3LQ8WTT2 800 aaKnown RBP17.86■□□□□ 0.45
USH1C-204ENST00000526313 BAG1Q99933 345 aaPredicted RBP17.86■□□□□ 0.45
USH1C-204ENST00000526313 PCDHA12Q9UN75 941 aa17.86■□□□□ 0.45
USH1C-204ENST00000526313 FER1L6Q2WGJ9 1857 aa17.85■□□□□ 0.45
USH1C-204ENST00000526313 MYMKA6NI61 221 aa17.85■□□□□ 0.45
USH1C-204ENST00000526313 PLA2G6O60733 806 aa17.85■□□□□ 0.45
USH1C-204ENST00000526313 ASIC1P78348 528 aa17.85■□□□□ 0.45
USH1C-204ENST00000526313 PDE4DQ08499 809 aa17.85■□□□□ 0.45
USH1C-204ENST00000526313 STK4Q13043 487 aa17.85■□□□□ 0.45
USH1C-204ENST00000526313 SNX29Q8TEQ0 813 aa17.85■□□□□ 0.45
USH1C-204ENST00000526313 EXOC1Q9NV70 894 aa17.85■□□□□ 0.45
USH1C-204ENST00000526313 TRIM49BA6NDI0 452 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 AKR1B15C9JRZ8 316 aaPredicted RBP17.84■□□□□ 0.45
USH1C-204ENST00000526313 PIK3CDO00329 1044 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 CTIFO43310 598 aaKnown RBP17.84■□□□□ 0.45
USH1C-204ENST00000526313 CCNE1P24864 410 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 EEF1GP26641 437 aaKnown RBP17.84■□□□□ 0.45
USH1C-204ENST00000526313 ADKP55263 362 aaKnown RBP17.84■□□□□ 0.45
USH1C-204ENST00000526313 SNAP25P60880 206 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 MCM6Q14566 821 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 Q4G0T1 1027 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 UNC13DQ70J99 1090 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 ANKRD20A12PQ8NF67 263 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 DUSP9Q99956 384 aaKnown RBP17.84■□□□□ 0.45
USH1C-204ENST00000526313 LRRC27Q9C0I9 530 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 TBX3O15119 743 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 FECHP22830 423 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 CIITAP33076 1130 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 SREBF1P36956 1147 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 ARHGAP4P98171 946 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 EHHADHQ08426 723 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 ECM1Q16610 540 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 KCNK18Q7Z418 384 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 REXO1L1PQ8IX06 675 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 CDK5RAP3Q96JB5 506 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 TMEM39BQ9GZU3 492 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 GOPCQ9HD26 462 aa17.84■□□□□ 0.45
USH1C-204ENST00000526313 BRCA1P38398 1863 aaKnown RBP17.84■□□□□ 0.45
USH1C-204ENST00000526313 WNT10BO00744 389 aa17.83■□□□□ 0.45
USH1C-204ENST00000526313 N4BP3O15049 544 aa17.83■□□□□ 0.45
USH1C-204ENST00000526313 STAT2P52630 851 aa17.83■□□□□ 0.45
USH1C-204ENST00000526313 RBL2Q08999 1139 aa17.83■□□□□ 0.45
USH1C-204ENST00000526313 TRAF1Q13077 416 aa17.83■□□□□ 0.45
USH1C-204ENST00000526313 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.45
USH1C-204ENST00000526313 CDAN1Q8IWY9 1227 aa17.83■□□□□ 0.45
USH1C-204ENST00000526313 KIAA0895Q8NCT3 520 aa17.83■□□□□ 0.45
USH1C-204ENST00000526313 P2RX5Q93086 422 aa17.83■□□□□ 0.45
USH1C-204ENST00000526313 FCER1AP12319 257 aa17.83■□□□□ 0.44
USH1C-204ENST00000526313 CAP2P40123 477 aa17.83■□□□□ 0.44
USH1C-204ENST00000526313 CIAPIN1Q6FI81 312 aa17.83■□□□□ 0.44
USH1C-204ENST00000526313 SLFN12Q8IYM2 578 aa17.83■□□□□ 0.44
USH1C-204ENST00000526313 ETNPPLQ8TBG4 499 aa17.83■□□□□ 0.44
USH1C-204ENST00000526313 LENG9Q96B70 501 aa17.83■□□□□ 0.44
USH1C-204ENST00000526313 VEZTQ9HBM0 779 aa17.83■□□□□ 0.44
USH1C-204ENST00000526313 BICDL2A1A5D9 508 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 CYP3A4P08684 503 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 CCT6AP40227 531 aaKnown RBP17.82■□□□□ 0.44
USH1C-204ENST00000526313 IKQ13123 557 aaPredicted RBP17.82■□□□□ 0.44
USH1C-204ENST00000526313 PPFIBP1Q86W92 1011 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 SPICE1Q8N0Z3 855 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 ZNF507Q8TCN5 953 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 CCDC51Q96ER9 411 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 SRRTQ9BXP5 876 aaKnown RBP17.82■□□□□ 0.44
USH1C-204ENST00000526313 NT5C3AQ9H0P0 336 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 VCPKMTQ9H867 229 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.82■□□□□ 0.44
USH1C-204ENST00000526313 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
USH1C-204ENST00000526313 KDM3AQ9Y4C1 1321 aa17.82■□□□□ 0.44
USH1C-204ENST00000526313 GYPCP04921 128 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms