RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 RARBP10826 455 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 SCG2P13521 617 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 MNX1P50219 401 aaPredicted RBP19.88■□□□□ 0.77
LMX1B-203ENST00000526117 PKN1Q16512 942 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 CCDC144BQ3MJ40 725 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 TAPT1Q6NXT6 567 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 CPLX2Q6PUV4 134 aaKnown RBP19.88■□□□□ 0.77
LMX1B-203ENST00000526117 HEATR3Q7Z4Q2 680 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 CUL5Q93034 780 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 PSTPIP2Q9H939 334 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 NCOA5Q9HCD5 579 aaKnown RBP19.88■□□□□ 0.77
LMX1B-203ENST00000526117 ZHX1Q9UKY1 873 aaPredicted RBP19.88■□□□□ 0.77
LMX1B-203ENST00000526117 hCG_1642624A0A1W2PR95 340 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 CDKL5O76039 1030 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 CCT2P78371 535 aaKnown RBP19.87■□□□□ 0.77
LMX1B-203ENST00000526117 PDE4DQ08499 809 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 RABEP1Q15276 862 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 ARHGEF16Q5VV41 709 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 IQSEC1Q6DN90 963 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 CCDC12Q8WUD4 166 aaPredicted RBP19.87■□□□□ 0.77
LMX1B-203ENST00000526117 PDCD2LQ9BRP1 358 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 SLKQ9H2G2 1235 aaPredicted RBP19.87■□□□□ 0.77
LMX1B-203ENST00000526117 RIC8AQ9NPQ8 531 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 Q9Y3F1 56 aa19.87■□□□□ 0.77
LMX1B-203ENST00000526117 DNM1LO00429 736 aa19.86■□□□□ 0.77
LMX1B-203ENST00000526117 CPLX1O14810 134 aa19.86■□□□□ 0.77
LMX1B-203ENST00000526117 FARP2O94887 1054 aaPredicted RBP19.86■□□□□ 0.77
LMX1B-203ENST00000526117 HOXA13P31271 388 aaPredicted RBP19.86■□□□□ 0.77
LMX1B-203ENST00000526117 AKAP17AQ02040 695 aaKnown RBP19.86■□□□□ 0.77
LMX1B-203ENST00000526117 SCRN1Q12765 414 aa19.86■□□□□ 0.77
LMX1B-203ENST00000526117 STXBP2Q15833 593 aa19.86■□□□□ 0.77
LMX1B-203ENST00000526117 TRIM22Q8IYM9 498 aa19.86■□□□□ 0.77
LMX1B-203ENST00000526117 ARRDC4Q8NCT1 418 aa19.86■□□□□ 0.77
LMX1B-203ENST00000526117 UPF3AQ9H1J1 476 aaKnown RBP19.86■□□□□ 0.77
LMX1B-203ENST00000526117 SH3GLB2Q9NR46 395 aa19.86■□□□□ 0.77
LMX1B-203ENST00000526117 STK36Q9NRP7 1315 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 EIF3JO75822 258 aaKnown RBP19.85■□□□□ 0.77
LMX1B-203ENST00000526117 STAM2O75886 525 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 NR3C2P08235 984 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 COL6A1P12109 1028 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 CST5P28325 142 aaPredicted RBP19.85■□□□□ 0.77
LMX1B-203ENST00000526117 NAPAP54920 295 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 TYW1BQ6NUM6 668 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 XRRA1Q6P2D8 792 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 VSIG10LQ86VR7 867 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 GPKOWQ92917 476 aaPredicted RBP eCLIP19.85■□□□□ 0.77
LMX1B-203ENST00000526117 PHKBQ93100 1093 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 GTF3C6Q969F1 213 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 LARP6Q9BRS8 491 aaKnown RBP19.85■□□□□ 0.77
LMX1B-203ENST00000526117 ZMYND12Q9H0C1 365 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 XPNPEP3Q9NQH7 507 aa19.85■□□□□ 0.77
LMX1B-203ENST00000526117 GNEQ9Y223 722 aaKnown RBP19.85■□□□□ 0.77
LMX1B-203ENST00000526117 NKRFO15226 690 aaKnown RBP eCLIP19.84■□□□□ 0.77
LMX1B-203ENST00000526117 ADCY6O43306 1168 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 ADAMTS4O75173 837 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 DEXIO95424 95 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 GJA9P57773 515 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 TNFAIP2Q03169 654 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 SSRP1Q08945 709 aaKnown RBP19.84■□□□□ 0.77
LMX1B-203ENST00000526117 PGM5Q15124 567 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 ME3Q16798 604 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 MCTP2Q6DN12 878 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 USP17L6PQ6QN14 398 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 FBXO16Q8IX29 292 aaPredicted RBP19.84■□□□□ 0.77
LMX1B-203ENST00000526117 SMARCC2Q8TAQ2 1214 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 SCFD2Q8WU76 684 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 SLC26A6Q9BXS9 759 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 LIMCH1Q9UPQ0 1083 aa19.84■□□□□ 0.77
LMX1B-203ENST00000526117 SYNRGQ9UMZ2 1314 aa19.83■□□□□ 0.77
LMX1B-203ENST00000526117 FOSP01100 380 aaPredicted RBP19.83■□□□□ 0.77
LMX1B-203ENST00000526117 EIF2AK2P19525 551 aaKnown RBP19.83■□□□□ 0.77
LMX1B-203ENST00000526117 CLK2P49760 499 aaKnown RBP19.83■□□□□ 0.77
LMX1B-203ENST00000526117 ADCY7P51828 1080 aa19.83■□□□□ 0.77
LMX1B-203ENST00000526117 STK3Q13188 491 aa19.83■□□□□ 0.77
LMX1B-203ENST00000526117 LRRC41Q15345 812 aa19.83■□□□□ 0.77
LMX1B-203ENST00000526117 DUSP28Q4G0W2 176 aa19.83■□□□□ 0.77
LMX1B-203ENST00000526117 NECAB2Q7Z6G3 386 aa19.83■□□□□ 0.77
LMX1B-203ENST00000526117 KLHDC9Q8NEP7 349 aa19.83■□□□□ 0.77
LMX1B-203ENST00000526117 CCDC148Q8NFR7 591 aa19.83■□□□□ 0.77
LMX1B-203ENST00000526117 TSEN34Q9BSV6 310 aaKnown RBP19.83■□□□□ 0.77
LMX1B-203ENST00000526117 DDX49Q9Y6V7 483 aaKnown RBP19.83■□□□□ 0.77
LMX1B-203ENST00000526117 KIAA1217Q5T5P2 1943 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 SMCO2A6NFE2 343 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 CCND2P30279 289 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 ADCYAP1R1P41586 468 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 AP3B2Q13367 1082 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 PCNX4Q63HM2 1172 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 KCNV1Q6PIU1 500 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 RNF180Q86T96 592 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 FCHSD1Q86WN1 690 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 ZSCAN31Q96LW9 406 aaPredicted RBP19.82■□□□□ 0.76
LMX1B-203ENST00000526117 PDGFCQ9NRA1 345 aa19.82■□□□□ 0.76
LMX1B-203ENST00000526117 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.81■□□□□ 0.76
LMX1B-203ENST00000526117 SMPD1P17405 629 aa19.81■□□□□ 0.76
LMX1B-203ENST00000526117 GNA11P29992 359 aa19.81■□□□□ 0.76
LMX1B-203ENST00000526117 CCSAPQ6IQ19 270 aaPredicted RBP19.81■□□□□ 0.76
LMX1B-203ENST00000526117 CCDC62Q6P9F0 684 aa19.81■□□□□ 0.76
LMX1B-203ENST00000526117 EEPD1Q7L9B9 569 aa19.81■□□□□ 0.76
LMX1B-203ENST00000526117 PAWRQ96IZ0 340 aaKnown RBP19.81■□□□□ 0.76
LMX1B-203ENST00000526117 WDR11Q9BZH6 1224 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms