RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 MMP19Q99542 508 aa7.13□□□□□ -1.27
CSDE1-210ENST00000525878 LNPKQ9C0E8 428 aa7.13□□□□□ -1.27
CSDE1-210ENST00000525878 USP40Q9NVE5 1235 aa7.13□□□□□ -1.27
CSDE1-210ENST00000525878 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-210ENST00000525878 EMC9Q9Y3B6 208 aa7.13□□□□□ -1.27
CSDE1-210ENST00000525878 DUSP10Q9Y6W6 482 aa7.13□□□□□ -1.27
CSDE1-210ENST00000525878 NPHS1O60500 1241 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 NASPP49321 788 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-210ENST00000525878 UBXN11Q5T124 520 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 MBLAC2Q68D91 279 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 VHLLQ6RSH7 139 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 FERMT3Q86UX7 667 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 NT5DC4Q86YG4 428 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 FAM169BQ8N8A8 192 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 DPF3Q92784 378 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 BORCS6Q96GS4 357 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 AKT3Q9Y243 479 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 SUGT1Q9Y2Z0 365 aa7.12□□□□□ -1.27
CSDE1-210ENST00000525878 NTRK1P04629 796 aa7.11□□□□□ -1.27
CSDE1-210ENST00000525878 ZNF143P52747 638 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-210ENST00000525878 HDLBPQ00341 1268 aaKnown RBP7.11□□□□□ -1.27
CSDE1-210ENST00000525878 HHIPL2Q6UWX4 724 aa7.11□□□□□ -1.27
CSDE1-210ENST00000525878 SEC16BQ96JE7 1060 aa7.11□□□□□ -1.27
CSDE1-210ENST00000525878 NTMQ9P121 344 aa7.11□□□□□ -1.27
CSDE1-210ENST00000525878 CLEC1BQ9P126 229 aa7.11□□□□□ -1.27
CSDE1-210ENST00000525878 SIT1Q9Y3P8 196 aa7.11□□□□□ -1.27
CSDE1-210ENST00000525878 FUCA1P04066 466 aa7.1□□□□□ -1.27
CSDE1-210ENST00000525878 C8BP07358 591 aa7.1□□□□□ -1.27
CSDE1-210ENST00000525878 PLS3P13797 630 aa7.1□□□□□ -1.27
CSDE1-210ENST00000525878 SARSP49591 514 aaKnown RBP7.1□□□□□ -1.27
CSDE1-210ENST00000525878 CYP4F3Q08477 520 aa7.1□□□□□ -1.27
CSDE1-210ENST00000525878 PPP2R5EQ16537 467 aa7.1□□□□□ -1.27
CSDE1-210ENST00000525878 ZNF761Q86XN6 746 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-210ENST00000525878 BVESQ8NE79 360 aa7.1□□□□□ -1.27
CSDE1-210ENST00000525878 GPRC5CQ9NQ84 441 aa7.1□□□□□ -1.27
CSDE1-210ENST00000525878 K7ESM1 405 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 KCNH1O95259 989 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 GJA9P57773 515 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 SCRN1Q12765 414 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 MIB1Q86YT6 1006 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 DCP2Q8IU60 420 aaKnown RBP7.09□□□□□ -1.27
CSDE1-210ENST00000525878 USP33Q8TEY7 942 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 ZBTB8AQ96BR9 441 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 MRGPRX3Q96LB0 322 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 RBM15Q96T37 977 aaKnown RBP eCLIP7.09□□□□□ -1.273e-7■■■■□ 23.4
CSDE1-210ENST00000525878 GORASP1Q9BQQ3 440 aa7.09□□□□□ -1.27
CSDE1-210ENST00000525878 ZBTB7CA1YPR0 619 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 SGSM2O43147 1006 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 THBDP07204 575 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 CYP2C8P10632 490 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 CNR2P34972 360 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 ZXDCQ2QGD7 858 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-210ENST00000525878 POMZP3Q6PJE2 187 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 TRIM59Q8IWR1 403 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 CRACR2BQ8N4Y2 399 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-210ENST00000525878 DDX11Q96FC9 970 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 APBA2Q99767 749 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 PCDH18Q9HCL0 1135 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 CYP26B1Q9NR63 512 aa7.08□□□□□ -1.28
CSDE1-210ENST00000525878 ITGB3P05106 788 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 INF2Q27J81 1249 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 GTF2IRD2BQ6EKJ0 949 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 TTLL7Q6ZT98 887 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 GTF2IRD2Q86UP8 949 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 Q8N1Y9 231 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 NPLOC4Q8TAT6 608 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 ADAMTS17Q8TE56 1095 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 CPLX3Q8WVH0 158 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 DDX1Q92499 740 aaKnown RBP7.07□□□□□ -1.28
CSDE1-210ENST00000525878 C11orf84Q9BUA3 381 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-210ENST00000525878 NKX2-4Q9H2Z4 354 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 MARCH2Q9P0N8 246 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 STRIP2Q9ULQ0 834 aa7.07□□□□□ -1.28
CSDE1-210ENST00000525878 ARNTLO00327 626 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 RPL13P26373 211 aaKnown RBP7.06□□□□□ -1.28
CSDE1-210ENST00000525878 THBS2P35442 1172 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 SLC6A11P48066 632 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 SMAD4Q13485 552 aaKnown RBP7.06□□□□□ -1.28
CSDE1-210ENST00000525878 NCAPHQ15003 741 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 C9orf131Q5VYM1 1079 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 ETV3LQ6ZN32 361 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 KYQ8NBH2 561 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 FRS2Q8WU20 508 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 SYT3Q9BQG1 590 aa7.06□□□□□ -1.28
CSDE1-210ENST00000525878 SMARCA5O60264 1052 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-210ENST00000525878 NAT2P11245 290 aa7.05□□□□□ -1.28
CSDE1-210ENST00000525878 MAGEA10P43363 369 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-210ENST00000525878 PRR31Q5SQ13 230 aa7.05□□□□□ -1.28
CSDE1-210ENST00000525878 RIOX2Q8IUF8 465 aa7.05□□□□□ -1.28
CSDE1-210ENST00000525878 SEC14L1Q92503 715 aa7.05□□□□□ -1.28
CSDE1-210ENST00000525878 TGIF2Q9GZN2 237 aa7.05□□□□□ -1.28
CSDE1-210ENST00000525878 AP5M1Q9H0R1 490 aa7.05□□□□□ -1.28
CSDE1-210ENST00000525878 MYRFQ9Y2G1 1151 aa7.05□□□□□ -1.28
CSDE1-210ENST00000525878 C22orf46C9J442 243 aa7.04□□□□□ -1.28
CSDE1-210ENST00000525878 NOP56O00567 594 aaKnown RBP7.04□□□□□ -1.28
CSDE1-210ENST00000525878 ZNF827Q17R98 1081 aa7.04□□□□□ -1.28
CSDE1-210ENST00000525878 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
CSDE1-210ENST00000525878 TEX2Q8IWB9 1127 aa7.04□□□□□ -1.28
CSDE1-210ENST00000525878 FAM26EQ8N5C1 309 aa7.04□□□□□ -1.28
CSDE1-210ENST00000525878 MRRFQ96E11 262 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms