RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 GNAQP50148 359 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 PDE4DQ08499 809 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 KCNA10Q16322 511 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 BLOC1S2Q6QNY1 142 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 SLC39A5Q6ZMH5 540 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 Q6ZUG5 572 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 NOL8Q76FK4 1167 aaKnown RBP13.74□□□□□ -0.21
CDC27-202ENST00000525495 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
CDC27-202ENST00000525495 RMDN3Q96TC7 470 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 ZMYND8Q9ULU4 1186 aaPredicted RBP13.74□□□□□ -0.21
CDC27-202ENST00000525495 RBM47A0AV96 593 aaKnown RBP13.73□□□□□ -0.21
CDC27-202ENST00000525495 ZBTB43O43298 467 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 SYN1P17600 705 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 EIF2AK2P19525 551 aaKnown RBP13.73□□□□□ -0.21
CDC27-202ENST00000525495 CASTP20810 708 aaKnown RBP13.73□□□□□ -0.21
CDC27-202ENST00000525495 RPS6KB1P23443 525 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 ACLYP53396 1101 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 RTP1P59025 263 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 NKX3-2P78367 333 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 BEX3Q00994 111 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 SNX17Q15036 470 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 IQSEC1Q6DN90 963 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 TLK2Q86UE8 772 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 NSUN6Q8TEA1 469 aaKnown RBP13.73□□□□□ -0.21
CDC27-202ENST00000525495 TSEN34Q9BSV6 310 aaKnown RBP13.73□□□□□ -0.21
CDC27-202ENST00000525495 PXMP2Q9NR77 195 aa13.73□□□□□ -0.21
CDC27-202ENST00000525495 FAM217BQ9NTX9 383 aaPredicted RBP13.73□□□□□ -0.21
CDC27-202ENST00000525495 DYNC1LI2O43237 492 aaPredicted RBP13.72□□□□□ -0.21
CDC27-202ENST00000525495 ASGR1P07306 291 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 FUT2Q10981 343 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 RTN1Q16799 776 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 TRIM60Q495X7 471 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 DUSP28Q4G0W2 176 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 GNASQ5JWF2 1037 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 BRF1Q92994 677 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 AGXT2Q9BYV1 514 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 WDR11Q9BZH6 1224 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 COLQQ9Y215 455 aaPredicted RBP13.72□□□□□ -0.21
CDC27-202ENST00000525495 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
CDC27-202ENST00000525495 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 GOLGA8BA8MQT2 603 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 GCOM1H8Y6P7 765 aaPredicted RBP13.71□□□□□ -0.21
CDC27-202ENST00000525495 ARIH2O95376 493 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 POLR2MP0CAP2 368 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 CDC27P30260 824 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 FGD1P98174 961 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 TRAF1Q13077 416 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 ARHGEF16Q5VV41 709 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 FBXL16Q8N461 479 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 SAMD3Q8N6K7 520 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 IL31RAQ8NI17 732 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 IWS1Q96ST2 819 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 MPHOSPH6Q99547 160 aaKnown RBP13.71□□□□□ -0.21
CDC27-202ENST00000525495 SPC25Q9HBM1 224 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 ZSWIM6Q9HCJ5 1215 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 MAP3K20Q9NYL2 800 aaKnown RBP13.71□□□□□ -0.21
CDC27-202ENST00000525495 SEC63Q9UGP8 760 aaKnown RBP13.71□□□□□ -0.21
CDC27-202ENST00000525495 ATP11BQ9Y2G3 1177 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 Q9Y3F1 56 aa13.71□□□□□ -0.21
CDC27-202ENST00000525495 LTBP2Q14767 1821 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 MOXD2PA6NHM9 499 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 NR3C2P08235 984 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 PSMA5P28066 241 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 FSCN1Q16658 493 aaKnown RBP13.7□□□□□ -0.22
CDC27-202ENST00000525495 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 RUFY3Q7L099 469 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 FCHSD1Q86WN1 690 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 PCSK9Q8NBP7 692 aaKnown RBP13.7□□□□□ -0.22
CDC27-202ENST00000525495 SCFD2Q8WU76 684 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 COPS5Q92905 334 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 PDCD2LQ9BRP1 358 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 UPF3BQ9BZI7 483 aaKnown RBP13.7□□□□□ -0.22
CDC27-202ENST00000525495 PRO3102Q9H379 93 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 STARD7Q9NQZ5 370 aa13.7□□□□□ -0.22
CDC27-202ENST00000525495 RBM28Q9NW13 759 aaKnown RBP13.7□□□□□ -0.22
CDC27-202ENST00000525495 NAP1L2Q9ULW6 460 aaPredicted RBP13.7□□□□□ -0.22
CDC27-202ENST00000525495 B4DLN1 442 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 MEIS2O14770 477 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 ADD1P35611 737 aaKnown RBP13.69□□□□□ -0.22
CDC27-202ENST00000525495 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
CDC27-202ENST00000525495 RCAN1P53805 252 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 TOB2Q14106 344 aaPredicted RBP13.69□□□□□ -0.22
CDC27-202ENST00000525495 PGM5Q15124 567 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 PPP2R5BQ15173 497 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 STXBP2Q15833 593 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 CCDC62Q6P9F0 684 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 USP17L6PQ6QN14 398 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 CXCL17Q6UXB2 119 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 SEPT14Q6ZU15 432 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
CDC27-202ENST00000525495 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
CDC27-202ENST00000525495 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
CDC27-202ENST00000525495 LAMA3Q16787 3333 aa13.69□□□□□ -0.22
CDC27-202ENST00000525495 RGS20O76081 388 aa13.68□□□□□ -0.22
CDC27-202ENST00000525495 SEC24BO95487 1268 aa13.68□□□□□ -0.22
CDC27-202ENST00000525495 TXNP10599 105 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms