RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PRKCQQ04759 706 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 SKOR2Q2VWA4 1001 aaPredicted RBP6.54□□□□□ -1.36
USP47-206ENST00000525367 PKN3Q6P5Z2 889 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 SPRED2Q7Z698 418 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 MTDHQ86UE4 582 aaKnown RBP6.54□□□□□ -1.36
USP47-206ENST00000525367 EXOC8Q8IYI6 725 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 MORC4Q8TE76 937 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 CHAC2Q8WUX2 184 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
USP47-206ENST00000525367 G6PC3Q9BUM1 346 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 PRDM7Q9NQW5 492 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 ZNF281Q9Y2X9 895 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 COBLO75128 1261 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 PDGFRBP09619 1106 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 JMJD7P0C870 316 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 CD8BP10966 210 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 KCNA6P17658 529 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 GPR85P60893 370 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 TESK1Q15569 626 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 RALGPS1Q5JS13 557 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 E4F1Q66K89 784 aaPredicted RBP6.53□□□□□ -1.36
USP47-206ENST00000525367 ZNF526Q8TF50 670 aaPredicted RBP6.53□□□□□ -1.36
USP47-206ENST00000525367 BCL7CQ8WUZ0 217 aaPredicted RBP6.53□□□□□ -1.36
USP47-206ENST00000525367 LEO1Q8WVC0 666 aaPredicted RBP6.53□□□□□ -1.36
USP47-206ENST00000525367 ASB11Q8WXH4 323 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 MAGEB10Q96LZ2 347 aaPredicted RBP6.53□□□□□ -1.36
USP47-206ENST00000525367 MMP19Q99542 508 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 MTFR1LQ9H019 292 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 GPR27Q9NS67 375 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 INTS7Q9NVH2 962 aaKnown RBP6.53□□□□□ -1.36
USP47-206ENST00000525367 COQ6Q9Y2Z9 468 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 PCDHA2Q9Y5H9 948 aa6.53□□□□□ -1.36
USP47-206ENST00000525367 C7orf72A4D263 438 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 USP2O75604 605 aaPredicted RBP6.52□□□□□ -1.37
USP47-206ENST00000525367 ASLP04424 464 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 SRGAP2CP0DJJ0 459 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 IGFALSP35858 605 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 NEK4P51957 841 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 KCNAB2Q13303 367 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 ODR4Q5SWX8 454 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 LBX2Q6XYB7 198 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 NFXL1Q6ZNB6 911 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 FERMT3Q86UX7 667 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 NLRP10Q86W26 655 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 IFNL3Q8IZI9 196 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 STAG1Q8WVM7 1258 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 DPF3Q92784 378 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 HHIPL1Q96JK4 782 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 FCRL2Q96LA5 508 aaPredicted RBP6.52□□□□□ -1.37
USP47-206ENST00000525367 CAAP1Q9H8G2 361 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 BTG4Q9NY30 223 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 SLAMF8Q9P0V8 285 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
USP47-206ENST00000525367 ARVCFO00192 962 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 AQP7O14520 342 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 PPP1R11O60927 126 aaPredicted RBP6.51□□□□□ -1.37
USP47-206ENST00000525367 PEX14O75381 377 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 GLRX3O76003 335 aaKnown RBP6.51□□□□□ -1.37
USP47-206ENST00000525367 MAP4K4O95819 1239 aaPredicted RBP6.51□□□□□ -1.37
USP47-206ENST00000525367 EFEMP2O95967 443 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 SSTR4P31391 388 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 PIK3R6Q5UE93 754 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 LHFPL2Q6ZUX7 228 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 DDX42Q86XP3 938 aaKnown RBP eCLIP6.51□□□□□ -1.37
USP47-206ENST00000525367 JMJD8Q96S16 334 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 ADAMTS10Q9H324 1103 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 IPPKQ9H8X2 491 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 GULP1Q9UBP9 304 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 FBLN5Q9UBX5 448 aa6.51□□□□□ -1.37
USP47-206ENST00000525367 CKMP06732 381 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 FPR2P25090 351 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 BCL6P41182 706 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 ZP2Q05996 745 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 CT47A1Q5JQC4 288 aaPredicted RBP6.5□□□□□ -1.37
USP47-206ENST00000525367 CDCA2Q69YH5 1023 aaPredicted RBP6.5□□□□□ -1.37
USP47-206ENST00000525367 ZCCHC8Q6NZY4 707 aaKnown RBP6.5□□□□□ -1.37
USP47-206ENST00000525367 RSPO2Q6UXX9 243 aaPredicted RBP6.5□□□□□ -1.37
USP47-206ENST00000525367 FMNL3Q8IVF7 1028 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 ZC3H7AQ8IWR0 971 aaKnown RBP6.5□□□□□ -1.37
USP47-206ENST00000525367 CCDC146Q8IYE0 955 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 AFAP1L2Q8N4X5 818 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 PCDH19Q8TAB3 1148 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.5□□□□□ -1.372e-9■■■■■ 34.5
USP47-206ENST00000525367 MAP6Q96JE9 813 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 CDIP1Q9H305 208 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 HOMER2Q9NSB8 354 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 BSDC1Q9NW68 430 aaPredicted RBP6.5□□□□□ -1.37
USP47-206ENST00000525367 GEMIN8Q9NWZ8 242 aaKnown RBP6.5□□□□□ -1.37
USP47-206ENST00000525367 SAMD15Q9P1V8 674 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 MAPRE3Q9UPY8 281 aa6.5□□□□□ -1.37
USP47-206ENST00000525367 ZNF891A8MT65 544 aaPredicted RBP6.49□□□□□ -1.37
USP47-206ENST00000525367 FADS2P1A8MWK0 482 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 SOD2P04179 222 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 ZGLP1P0C6A0 271 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 SOX5P35711 763 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 NFKB2Q00653 900 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 STRN3Q13033 797 aa6.49□□□□□ -1.37
USP47-206ENST00000525367 FAM50AQ14320 339 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms