RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 TSPAN17Q96FV3 270 aa8.41□□□□□ -1.06
COPB1-203ENST00000525214 DBR1Q9UK59 544 aaKnown RBP8.41□□□□□ -1.06
COPB1-203ENST00000525214 TRIM13O60858 407 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 FUCA1P04066 466 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 ASGR2P07307 311 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 INHBBP09529 407 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 HOXC12P31275 282 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 DDR2Q16832 855 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 PRSS53Q2L4Q9 553 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 ST7Q9NRC1 585 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 LRP2BPQ9P2M1 347 aa8.4□□□□□ -1.06
COPB1-203ENST00000525214 KRTAP9-7A8MTY7 169 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 NTRK1P04629 796 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 SNRPB2P08579 225 aaKnown RBP8.39□□□□□ -1.07
COPB1-203ENST00000525214 PFKLP17858 780 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 MC3RP41968 323 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 VMACQ2NL98 169 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 DENND5AQ6IQ26 1287 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 EEPD1Q7L9B9 569 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 ALG3Q92685 438 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 C1orf159Q96HA4 380 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 PWWP2AQ96N64 755 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 KCNC2Q96PR1 638 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 RNF38Q9H0F5 515 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 MARCH2Q9P0N8 246 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 SIT1Q9Y3P8 196 aa8.39□□□□□ -1.07
COPB1-203ENST00000525214 BMP7P18075 431 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 PMLP29590 882 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 ECI1P42126 302 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 GRIA2P42262 883 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 GFRA1P56159 465 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 TESK1Q15569 626 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 TARBP2Q15633 366 aaKnown RBP8.38□□□□□ -1.07
COPB1-203ENST00000525214 E4F1Q66K89 784 aaPredicted RBP8.38□□□□□ -1.07
COPB1-203ENST00000525214 TEX2Q8IWB9 1127 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 USP33Q8TEY7 942 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 PEX11GQ96HA9 241 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 EPN3Q9H201 632 aa8.38□□□□□ -1.07
COPB1-203ENST00000525214 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
COPB1-203ENST00000525214 NLRP10Q86W26 655 aa8.37□□□□□ -1.07
COPB1-203ENST00000525214 MARCH10Q8NA82 808 aaPredicted RBP8.37□□□□□ -1.07
COPB1-203ENST00000525214 TMEM145Q8NBT3 493 aa8.37□□□□□ -1.07
COPB1-203ENST00000525214 BTG4Q9NY30 223 aa8.37□□□□□ -1.07
COPB1-203ENST00000525214 FBXL7Q9UJT9 491 aa8.37□□□□□ -1.07
COPB1-203ENST00000525214 A0A1W2PQU0 124 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 FPR2P25090 351 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 FOXO4P98177 505 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 ACBD5Q5T8D3 534 aaPredicted RBP8.36□□□□□ -1.07
COPB1-203ENST00000525214 IQCEQ6IPM2 695 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 Q8N1Y9 231 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 TP53I13Q8NBR0 393 aaPredicted RBP8.36□□□□□ -1.07
COPB1-203ENST00000525214 DIO2Q92813 273 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 PARD6AQ9NPB6 346 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 RAPGEFL1Q9UHV5 662 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 NUDT5Q9UKK9 219 aa8.36□□□□□ -1.07
COPB1-203ENST00000525214 R3HCC1Q9Y3T6 440 aaKnown RBP8.36□□□□□ -1.07
COPB1-203ENST00000525214 FFAR3O14843 346 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 MEFVO15553 781 aaPredicted RBP8.35□□□□□ -1.07
COPB1-203ENST00000525214 CPP00450 1065 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 NCAM1P13591 858 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 HOXA5P20719 270 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 ZC3H6P61129 1189 aaKnown RBP8.35□□□□□ -1.07
COPB1-203ENST00000525214 PPP2R2AP63151 447 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 KCNAB2Q13303 367 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 SLC9A5Q14940 896 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 PPIL6Q8IXY8 311 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 RCBTB1Q8NDN9 531 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 CCDC140Q96MF4 163 aa8.35□□□□□ -1.07
COPB1-203ENST00000525214 C22orf46C9J442 243 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 SGSM2O43147 1006 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 LCP1P13796 627 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 BCL6P41182 706 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 KCNJ6P48051 423 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 RPL11P62913 178 aaKnown RBP8.34□□□□□ -1.07
COPB1-203ENST00000525214 HTRA3P83110 453 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 CAP1Q01518 475 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 VWA3BQ502W6 1294 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 NAALADL2Q58DX5 795 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 B3GNT8Q7Z7M8 397 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 LINC01356Q8N9X3 169 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 FNIP1Q8TF40 1166 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 C20orf173Q96LM9 149 aa8.34□□□□□ -1.07
COPB1-203ENST00000525214 TIMM13Q9Y5L4 95 aaPredicted RBP8.34□□□□□ -1.07
COPB1-203ENST00000525214 ZBTB7AO95365 584 aa8.33□□□□□ -1.08
COPB1-203ENST00000525214 RBM10P98175 930 aaKnown RBP8.33□□□□□ -1.08
COPB1-203ENST00000525214 RAB33AQ14088 237 aa8.33□□□□□ -1.08
COPB1-203ENST00000525214 DCP2Q8IU60 420 aaKnown RBP8.33□□□□□ -1.08
COPB1-203ENST00000525214 CPA5Q8WXQ8 436 aa8.33□□□□□ -1.08
COPB1-203ENST00000525214 ZCCHC4Q9H5U6 513 aa8.33□□□□□ -1.08
COPB1-203ENST00000525214 X6R8D5 127 aa8.33□□□□□ -1.08
COPB1-203ENST00000525214 LTBRP36941 435 aa8.32□□□□□ -1.08
COPB1-203ENST00000525214 LILRA6Q6PI73 481 aa8.32□□□□□ -1.08
COPB1-203ENST00000525214 RIOX2Q8IUF8 465 aa8.32□□□□□ -1.08
COPB1-203ENST00000525214 XYLT2Q9H1B5 865 aa8.32□□□□□ -1.08
COPB1-203ENST00000525214 FAN1Q9Y2M0 1017 aa8.32□□□□□ -1.08
COPB1-203ENST00000525214 NPFFR2Q9Y5X5 522 aa8.32□□□□□ -1.08
COPB1-203ENST00000525214 PMF1-BGLAPU3KQ54 211 aa8.32□□□□□ -1.08
COPB1-203ENST00000525214 A0A0G2JLL6 359 aaPredicted RBP8.31□□□□□ -1.08
COPB1-203ENST00000525214 AGRPO00253 132 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms