RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 VSIG8P0DPA2 414 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 FGFR1P11362 822 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 KCNA2P16389 499 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 XPAP23025 273 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 AKAP5P24588 427 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 SMARCA1P28370 1054 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 ELF1P32519 619 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 ADCYAP1R1P41586 468 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 HTRA3P83110 453 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 CACNB2Q08289 660 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 IFIT5Q13325 482 aaKnown RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 AP3B2Q13367 1082 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 SMC1AQ14683 1233 aaKnown RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 PLCB4Q15147 1175 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 CCNG2Q16589 344 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 INTS3Q68E01 1043 aaKnown RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 UBE2R2Q712K3 238 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 PDZD4Q76G19 769 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 KIF18BQ86Y91 864 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 GPR161Q8N6U8 529 aaKnown RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 FAM156AQ8NDB6 213 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 SLC30A5Q8TAD4 765 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 ADAMTS18Q8TE60 1221 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 C7orf43Q8WVR3 580 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 ZFPM2Q8WW38 1151 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 TMEM40Q8WWA1 233 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 IPCEF1Q8WWN9 437 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 SMARCC1Q92922 1105 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 CNKSR1Q969H4 720 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 AHCYL2Q96HN2 611 aaKnown RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 SCLYQ96I15 445 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 BARD1Q99728 777 aaKnown RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 TTLL2Q9BWV7 592 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 SMOC1Q9H4F8 434 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 ELAC1Q9H777 363 aaKnown RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 FAM204AQ9H8W3 233 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 DBNDD1Q9H9R9 158 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 POLMQ9NP87 494 aaPredicted RBP5.21□□□□□ -1.58
CD44-213ENST00000525209 SEC31BQ9NQW1 1179 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 SALL4Q9UJQ4 1053 aa5.21□□□□□ -1.58
CD44-213ENST00000525209 GPRASP1Q5JY77 1395 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 TRIM64A6NGJ6 449 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 TRIM64BA6NI03 449 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 B4E171 279 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PCDHGA12O60330 932 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 GRIN3BO60391 1043 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 FKBP9O95302 570 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 BAG2O95816 211 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 TPM2P07951 284 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 ACRP10323 421 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PABPC1P11940 636 aaKnown RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 KIF5BP33176 963 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PPM1AP35813 382 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 GRIK1P39086 918 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 ZNF132P52740 706 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PPP2R2AP63151 447 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 GABREP78334 506 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 SEMA5AQ13591 1074 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 SKOR2Q2VWA4 1001 aaPredicted RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 SV2CQ496J9 727 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 ZCCHC8Q6NZY4 707 aaKnown RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 PGM2L1Q6PCE3 622 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 CPLX2Q6PUV4 134 aaKnown RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 NSMFQ6X4W1 530 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 SYDE1Q6ZW31 735 aaPredicted RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 FKBP9P1Q75LS8 142 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 DPP9Q86TI2 863 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 TTC30AQ86WT1 665 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 CCNJLQ8IV13 435 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 OR2C3Q8N628 320 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 KDF1Q8NAX2 398 aaPredicted RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 BTN2A2Q8WVV5 523 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 OSBP2Q969R2 916 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 CENPTQ96BT3 561 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 RIPOR3Q96MK2 946 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 IWS1Q96ST2 819 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 RMDN3Q96TC7 470 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 MAP3K14Q99558 947 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 CHCHD6Q9BRQ6 235 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 FHDC1Q9C0D6 1143 aaPredicted RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 VPS11Q9H270 941 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 NFKBIL1Q9UBC1 381 aaPredicted RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 SEL1LQ9UBV2 794 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 CCDC39Q9UFE4 941 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 ZNF112Q9UJU3 913 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PPP1R9AQ9ULJ8 1098 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PCDHGA9Q9Y5G4 932 aaKnown RBP5.2□□□□□ -1.58
CD44-213ENST00000525209 PCDHGA8Q9Y5G5 932 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PCDHGA7Q9Y5G6 932 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PCDHGA6Q9Y5G7 932 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PCDHGA3Q9Y5H0 932 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 PCDHGA2Q9Y5H1 932 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 MRFAP1Q9Y605 127 aa5.2□□□□□ -1.58
CD44-213ENST00000525209 H3BRJ5 948 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ULK1O75385 1050 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 OFD1O75665 1012 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ADH1AP07327 375 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 ITPKAP23677 461 aa5.19□□□□□ -1.58
CD44-213ENST00000525209 KRT9P35527 623 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms