RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 PURAQ00577 322 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 PPP2R5BQ15173 497 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 SLC35G1Q2M3R5 365 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 RASIP1Q5U651 963 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 TMEM199Q8N511 208 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 DNERQ8NFT8 737 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 SYTL5Q8TDW5 730 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 VWCEQ96DN2 955 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 NOC4LQ9BVI4 516 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 SENP2Q9HC62 589 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 TRMT13Q9NUP7 481 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 CXXC1Q9P0U4 656 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 PNMA2Q9UL42 364 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 ABCB11O95342 1321 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 RAD50Q92878 1312 aa13.81□□□□□ -0.2
CLNS1A-202ENST00000525064 CHD7Q9P2D1 2997 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 RBAK-RBAKDNI3L0D1 243 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 OPLAHO14841 1288 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 CYP2C9P11712 490 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 IFIT1BQ5T764 474 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 RGS22Q8NE09 1264 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 SCLYQ96I15 445 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 UBAC1Q9BSL1 405 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 ALDH8A1Q9H2A2 487 aaPredicted RBP13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 CNNM2Q9H8M5 875 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 IL23AQ9NPF7 189 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 MAD2L2Q9UI95 211 aa13.8□□□□□ -0.2
CLNS1A-202ENST00000525064 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 CPT1AP50416 773 aa13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 GRIN2CQ14957 1233 aa13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 CCDC62Q6P9F0 684 aa13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 STOX1Q6ZVD7 989 aa13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 FBXO11Q86XK2 927 aa13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 MAFAQ8NHW3 353 aaPredicted RBP13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 SCFD2Q8WU76 684 aa13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 PBX4Q9BYU1 374 aa13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 POLR3EQ9NVU0 708 aa13.79□□□□□ -0.2
CLNS1A-202ENST00000525064 VCANP13611 3396 aa13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 TMEM265A0A087WTH1 108 aa13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 NKRFO15226 690 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 TXNP10599 105 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 LY6KQ17RY6 165 aa13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 NBPF20Q3BBV1 942 aa13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 PSRC1Q6PGN9 363 aaPredicted RBP13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 CHST3Q7LGC8 479 aa13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 HERVK_113Q902F9 699 aa13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 TIFAQ96CG3 184 aa13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 MTG1Q9BT17 334 aaPredicted RBP13.78□□□□□ -0.2
CLNS1A-202ENST00000525064 PALM3A6NDB9 673 aaPredicted RBP13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 A6NJR5 290 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 KLRF2D3W0D1 207 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 SGSM2O43147 1006 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 CFBP00751 764 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 FOSL2P15408 326 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 ANTXR2P58335 489 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 ARHGAP1Q07960 439 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 TTLL4Q14679 1199 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 SEPT14Q6ZU15 432 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 OTOP2Q7RTS6 562 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 RMDN3Q96TC7 470 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 MPHOSPH6Q99547 160 aaKnown RBP13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 MRPL11Q9Y3B7 192 aaKnown RBP13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 REV3LO60673 3130 aa13.77□□□□□ -0.21
CLNS1A-202ENST00000525064 E7EWF7 191 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 CYTH3O43739 400 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 FGBP02675 491 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 MMP3P08254 477 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 HSD17B4P51659 736 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 COL9A3Q14050 684 aaPredicted RBP13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 GRM4Q14833 912 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 FAM47CQ5HY64 1035 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 IL31RAQ8NI17 732 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 NSUN6Q8TEA1 469 aaKnown RBP13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 AFG1LQ8WV93 481 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 SEZ6LQ9BYH1 1024 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 PXMP2Q9NR77 195 aa13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 YBX2Q9Y2T7 364 aaKnown RBP13.76□□□□□ -0.21
CLNS1A-202ENST00000525064 CUL9Q8IWT3 2517 aa13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 IFIT3O14879 490 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 ZBTB5O15062 677 aa13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 RGS20O76081 388 aa13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 GHRHRQ02643 423 aa13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 TRDNQ13061 729 aa13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 ARHGEF16Q5VV41 709 aa13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 HOMER1Q86YM7 354 aa13.75□□□□□ -0.21
CLNS1A-202ENST00000525064 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms