RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 LZTR1Q8N653 840 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 SMARCC2Q8TAQ2 1214 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 GPRASP2Q96D09 838 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 MRGPRX3Q96LB0 322 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 LNPKQ9C0E8 428 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 KIAA1522Q9P206 1035 aaPredicted RBP3.03□□□□□ -1.92
CD44-212ENST00000524922 GULP1Q9UBP9 304 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 CNOT11Q9UKZ1 510 aaKnown RBP3.03□□□□□ -1.92
CD44-212ENST00000524922 EMC9Q9Y3B6 208 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 SIT1Q9Y3P8 196 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 BACE2Q9Y5Z0 518 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 CADPSQ9ULU8 1353 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 SLC7A5Q01650 507 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 SLC9A5Q14940 896 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 NT5DC1Q5TFE4 455 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 HEATR6Q6AI08 1181 aaKnown RBP3.02□□□□□ -1.93
CD44-212ENST00000524922 DBX2Q6ZNG2 339 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 MIB1Q86YT6 1006 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 CCDC103Q8IW40 242 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 NLGN1Q8N2Q7 840 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 OR6P1Q8NGX9 317 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 NPLOC4Q8TAT6 608 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 ALG3Q92685 438 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 SPATA32Q96LK8 384 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 MMP19Q99542 508 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 GORASP1Q9BQQ3 440 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 BDH2Q9BUT1 245 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 LGR4Q9BXB1 951 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.02□□□□□ -1.93
CD44-212ENST00000524922 SLC12A7Q9Y666 1083 aa3.02□□□□□ -1.93
CD44-212ENST00000524922 A0A1W2PQ27 194 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 A0A1W2PQ64 194 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 A0A1W2PQC6 194 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 A0A1W2PQD8 194 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 UNCXA6NJT0 531 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 SGSM2O43147 1006 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 TBX1O43435 398 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 PPM1BO75688 479 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 NTRK1P04629 796 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 ITGB3P05106 788 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 THBDP07204 575 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 PLS3P13797 630 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 NASPP49321 788 aaPredicted RBP3.01□□□□□ -1.93
CD44-212ENST00000524922 MFAP1P55081 439 aaKnown RBP3.01□□□□□ -1.93
CD44-212ENST00000524922 AMPD2Q01433 879 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 TESK1Q15569 626 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 SPATS1Q496A3 300 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 FERMT3Q86UX7 667 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 NLRP10Q86W26 655 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 NT5DC4Q86YG4 428 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 FAM26EQ8N5C1 309 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 KREMEN2Q8NCW0 462 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 FRS2Q8WU20 508 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 PEX11GQ96HA9 241 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 GPRC5CQ9NQ84 441 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 CLEC1BQ9P126 229 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 TMEFF2Q9UIK5 374 aaPredicted RBP3.01□□□□□ -1.93
CD44-212ENST00000524922 FBXL7Q9UJT9 491 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.01□□□□□ -1.93
CD44-212ENST00000524922 ARHGEF11O15085 1522 aa3.01□□□□□ -1.93
CD44-212ENST00000524922 BAZ1BQ9UIG0 1483 aaKnown RBP3.01□□□□□ -1.93
CD44-212ENST00000524922 NPHP3-ACAD11A0A0J9YXS1 232 aa3□□□□□ -1.93
CD44-212ENST00000524922 ANKRD34BA5PLL1 514 aa3□□□□□ -1.93
CD44-212ENST00000524922 ZBTB7AO95365 584 aa3□□□□□ -1.93
CD44-212ENST00000524922 PAMP19021 973 aa3□□□□□ -1.93
CD44-212ENST00000524922 THBS2P35442 1172 aa3□□□□□ -1.93
CD44-212ENST00000524922 SEPHS1P49903 392 aa3□□□□□ -1.93
CD44-212ENST00000524922 PLP2Q04941 152 aa3□□□□□ -1.93
CD44-212ENST00000524922 SCRN1Q12765 414 aa3□□□□□ -1.93
CD44-212ENST00000524922 TMCO4Q5TGY1 634 aa3□□□□□ -1.93
CD44-212ENST00000524922 C9orf131Q5VYM1 1079 aa3□□□□□ -1.93
CD44-212ENST00000524922 DENND5AQ6IQ26 1287 aa3□□□□□ -1.93
CD44-212ENST00000524922 KIAA1211LQ6NV74 962 aa3□□□□□ -1.93
CD44-212ENST00000524922 TRIM59Q8IWR1 403 aa3□□□□□ -1.93
CD44-212ENST00000524922 BVESQ8NE79 360 aa3□□□□□ -1.93
CD44-212ENST00000524922 ADAMTS17Q8TE56 1095 aa3□□□□□ -1.93
CD44-212ENST00000524922 DDX11Q96FC9 970 aa3□□□□□ -1.93
CD44-212ENST00000524922 C1orf159Q96HA4 380 aa3□□□□□ -1.93
CD44-212ENST00000524922 SEC16BQ96JE7 1060 aa3□□□□□ -1.93
CD44-212ENST00000524922 CRBNQ96SW2 442 aa3□□□□□ -1.93
CD44-212ENST00000524922 C11orf84Q9BUA3 381 aaPredicted RBP3□□□□□ -1.93
CD44-212ENST00000524922 GBP3Q9H0R5 595 aa3□□□□□ -1.93
CD44-212ENST00000524922 CDIP1Q9H305 208 aa3□□□□□ -1.93
CD44-212ENST00000524922 WASF3Q9UPY6 502 aa3□□□□□ -1.93
CD44-212ENST00000524922 WDR97A6NE52 1622 aa3□□□□□ -1.93
CD44-212ENST00000524922 SMARCA4P51532 1647 aa3□□□□□ -1.93
CD44-212ENST00000524922 TRBV23OR9-2A0A075B6M9 112 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 A0A1W2PQJ5 194 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 KCNH1O95259 989 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 FUCA1P04066 466 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 SCG5P05408 212 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 TNFRSF1AP19438 455 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 RPL13P26373 211 aaKnown RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 CNR2P34972 360 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 MAGEA10P43363 369 aaPredicted RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 SLC6A11P48066 632 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 SARSP49591 514 aaKnown RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 ZNF143P52747 638 aaPredicted RBP2.99□□□□□ -1.93
CD44-212ENST00000524922 ITGA1P56199 1179 aa2.99□□□□□ -1.93
CD44-212ENST00000524922 SMAD4Q13485 552 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms