RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 LRRIQ1Q96JM4 1722 aa4.74□□□□□ -1.65
CSDE1-208ENST00000524652 DISP1Q96F81 1524 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 UGGT2Q9NYU1 1516 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 TRBV23OR9-2A0A075B6M9 112 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 ZC3H12DA2A288 527 aaKnown RBP4.73□□□□□ -1.65
CSDE1-208ENST00000524652 F8W031 263 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-208ENST00000524652 FFAR3O14843 346 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 NCAM1P13591 858 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 TACR1P25103 407 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 LIMS1P48059 325 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 SEPHS1P49903 392 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 CASP7P55210 303 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 PRR5P85299 388 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 TRIM26Q12899 539 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-208ENST00000524652 ERICH6BQ5W0A0 696 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 ADAT2Q7Z6V5 191 aaKnown RBP4.73□□□□□ -1.65
CSDE1-208ENST00000524652 NT5DC4Q86YG4 428 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 ARHGEF39Q8N4T4 335 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 TP53I13Q8NBR0 393 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-208ENST00000524652 NETO2Q8NC67 525 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 FEZF2Q8TBJ5 459 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 TSPAN17Q96FV3 270 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 TEPSINQ96N21 525 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 PCDHB10Q9UN67 800 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-208ENST00000524652 FAN1Q9Y2M0 1017 aa4.73□□□□□ -1.65
CSDE1-208ENST00000524652 LOC105371045A0A1W2PR82 267 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 C2orf71A6NGG8 1288 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 HTRA3P83110 453 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 FOXO4P98177 505 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 HDLBPQ00341 1268 aaKnown RBP4.72□□□□□ -1.65
CSDE1-208ENST00000524652 VWA3BQ502W6 1294 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 FRMD5Q7Z6J6 570 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 LZTR1Q8N653 840 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 FNIP1Q8TF40 1166 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 SEC16BQ96JE7 1060 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 NUDT5Q9UKK9 219 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 STRIP2Q9ULQ0 834 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 PLA2G2DQ9UNK4 145 aa4.72□□□□□ -1.65
CSDE1-208ENST00000524652 SRCAPQ6ZRS2 3230 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 HECW2Q9P2P5 1572 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 ARAP1Q96P48 1450 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 SH3D21A4FU49 640 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 ANKRD34BA5PLL1 514 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 VAMP4O75379 141 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 PLA2G1BP04054 148 aaKnown RBP4.71□□□□□ -1.66
CSDE1-208ENST00000524652 ASGR2P07307 311 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 ATF2P15336 505 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 PAMP19021 973 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 KCNC1P48547 511 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 NASPP49321 788 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-208ENST00000524652 ZNF143P52747 638 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-208ENST00000524652 SLC9A5Q14940 896 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 PPP2R5EQ16537 467 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 DPY19L1Q2PZI1 675 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 VHLLQ6RSH7 139 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 SAPCD2Q86UD0 394 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 ZDHHC14Q8IZN3 488 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 CRACR2BQ8N4Y2 399 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-208ENST00000524652 SYT8Q8NBV8 401 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 ALG3Q92685 438 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 MRRFQ96E11 262 aaKnown RBP4.71□□□□□ -1.66
CSDE1-208ENST00000524652 PEX11GQ96HA9 241 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 FGD4Q96M96 766 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.71□□□□□ -1.662e-6■■■□□ 17
CSDE1-208ENST00000524652 SUSD2Q9UGT4 822 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 SUGT1Q9Y2Z0 365 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 RWDD3Q9Y3V2 267 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 PMF1-BGLAPU3KQ54 211 aa4.71□□□□□ -1.66
CSDE1-208ENST00000524652 PRG4Q92954 1404 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-208ENST00000524652 ARHGAP35Q9NRY4 1499 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 NPHP3-ACAD11A0A0J9YXS1 232 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 ZBTB7AO95365 584 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 CELA3BP08861 270 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 NAT2P11245 290 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 WWC2Q6AWC2 1192 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 KIAA1211LQ6NV74 962 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 POMZP3Q6PJE2 187 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 LIPIQ6XZB0 460 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 B3GNT8Q7Z7M8 397 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 ZNF513Q8N8E2 541 aaPredicted RBP4.7□□□□□ -1.66
CSDE1-208ENST00000524652 CPLX3Q8WVH0 158 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 CPA5Q8WXQ8 436 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 COPS5Q92905 334 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 MTA3Q9BTC8 594 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 TGIF2Q9GZN2 237 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 FBLN5Q9UBX5 448 aa4.7□□□□□ -1.66
CSDE1-208ENST00000524652 ADCY10Q96PN6 1610 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 TNIKQ9UKE5 1360 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 PMLP29590 882 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 MC3RP41968 323 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 SLURP1P55000 103 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 SKOR2Q2VWA4 1001 aaPredicted RBP4.69□□□□□ -1.66
CSDE1-208ENST00000524652 CPNE8Q86YQ8 564 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 ADAM7Q9H2U9 754 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 GULP1Q9UBP9 304 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 APEX2Q9UBZ4 518 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 AKT3Q9Y243 479 aa4.69□□□□□ -1.66
CSDE1-208ENST00000524652 EFCAB5A4FU69 1503 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 C7orf72A4D263 438 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms