RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 PURAQ00577 322 aaKnown RBP22.72■■□□□ 1.23
NDUFS3-202ENST00000524568 TROAPQ12815 778 aa22.72■■□□□ 1.23
NDUFS3-202ENST00000524568 FAM109BQ6ICB4 259 aaPredicted RBP22.72■■□□□ 1.23
NDUFS3-202ENST00000524568 MFSD5Q6N075 450 aa22.72■■□□□ 1.23
NDUFS3-202ENST00000524568 RALYLQ86SE5 291 aaKnown RBP22.72■■□□□ 1.23
NDUFS3-202ENST00000524568 HOMER1Q86YM7 354 aa22.72■■□□□ 1.23
NDUFS3-202ENST00000524568 IGDCC4Q8TDY8 1250 aa22.72■■□□□ 1.23
NDUFS3-202ENST00000524568 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.72■■□□□ 1.232e-7■□□□□ 9.3
NDUFS3-202ENST00000524568 DOCK5Q9H7D0 1870 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 CABYRO75952 493 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 ACRP10323 421 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 EIF2AK2P19525 551 aaKnown RBP22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 WTAPQ15007 396 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 SCFD2Q8WU76 684 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 PIGSQ96S52 555 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 RMDN3Q96TC7 470 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 ESYT1Q9BSJ8 1104 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 MYL10Q9BUA6 226 aa22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 MRPL11Q9Y3B7 192 aaKnown RBP22.71■■□□□ 1.23
NDUFS3-202ENST00000524568 RBAK-RBAKDNI3L0D1 243 aa22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 ZBTB5O15062 677 aa22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 ZEB2O60315 1214 aa22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 CFBP00751 764 aa22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 TXNP10599 105 aaKnown RBP22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 TMEM67Q5HYA8 995 aa22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 CCDC62Q6P9F0 684 aa22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 SEPT14Q6ZU15 432 aa22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 AMNQ9BXJ7 453 aa22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 TTYH1Q9H313 450 aaPredicted RBP22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 TRMT13Q9NUP7 481 aaKnown RBP22.7■■□□□ 1.22
NDUFS3-202ENST00000524568 UNC80Q8N2C7 3258 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 TRIP12Q14669 1992 aaPredicted RBP22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 TLR3O15455 904 aaKnown RBP22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 HOXA13P31271 388 aaPredicted RBP22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 HSD17B4P51659 736 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 LY6KQ17RY6 165 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 IL31RAQ8NI17 732 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 NSUN6Q8TEA1 469 aaKnown RBP22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 PIBF1Q8WXW3 757 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 NOC4LQ9BVI4 516 aaKnown RBP22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 WNT8AQ9H1J5 351 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 ALDH8A1Q9H2A2 487 aaPredicted RBP22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 RIOX1Q9H6W3 641 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 LY9Q9HBG7 655 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 PXMP2Q9NR77 195 aa22.69■■□□□ 1.22
NDUFS3-202ENST00000524568 TANC1Q9C0D5 1861 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 A0A0C4DFX4 3053 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 CPT1AP50416 773 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 GHRHRQ02643 423 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 TMEM240Q5SV17 173 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 MCF2L2Q86YR7 1114 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 VWCEQ96DN2 955 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 ZFP91Q96JP5 570 aaPredicted RBP22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 HIPK3Q9H422 1215 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 STXBP5LQ9Y2K9 1186 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 PCDHA1Q9Y5I3 950 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 CHD9Q3L8U1 2897 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 PRUNE2Q8WUY3 3088 aa22.68■■□□□ 1.22
NDUFS3-202ENST00000524568 ERICH2A1L162 156 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 A6NJR5 290 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 SLC27A2O14975 620 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 CYP2C9P11712 490 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 CCL23P55773 120 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 SMAD3P84022 425 aaKnown RBP22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 ARHGAP1Q07960 439 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 TTLL4Q14679 1199 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 ARHGEF16Q5VV41 709 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 MPHOSPH6Q99547 160 aaKnown RBP22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 POLR3EQ9NVU0 708 aa22.67■■□□□ 1.22
NDUFS3-202ENST00000524568 NKRFO15226 690 aaKnown RBP eCLIP22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 PRC1O43663 620 aa22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 PPIGQ13427 754 aaKnown RBP eCLIP22.66■■□□□ 1.224e-7■□□□□ 11.3
NDUFS3-202ENST00000524568 NBPF20Q3BBV1 942 aa22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 ZNF697Q5TEC3 545 aa22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 ZNF365Q70YC5 407 aa22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 RAB11FIP4Q86YS3 637 aa22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 ZNF654Q8IZM8 581 aa22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 AFG1LQ8WV93 481 aa22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 MTG1Q9BT17 334 aaPredicted RBP22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 TET1Q8NFU7 2136 aa22.66■■□□□ 1.22
NDUFS3-202ENST00000524568 GRXCR1A8MXD5 290 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 RGS20O76081 388 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 NR3C2P08235 984 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 RXRAP19793 462 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 RASIP1Q5U651 963 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 CREB3L3Q68CJ9 461 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 CENPQQ7L2Z9 268 aaPredicted RBP22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 TMEM199Q8N511 208 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 IWS1Q96ST2 819 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 LRRC2Q9BYS8 371 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 MAF1Q9H063 256 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 SEMA6BQ9H3T3 888 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 MYO9BQ13459 2157 aa22.65■■□□□ 1.22
NDUFS3-202ENST00000524568 B4DLN1 442 aa22.64■■□□□ 1.21
NDUFS3-202ENST00000524568 SH2B2O14492 632 aaPredicted RBP22.64■■□□□ 1.21
NDUFS3-202ENST00000524568 MMP3P08254 477 aa22.64■■□□□ 1.21
NDUFS3-202ENST00000524568 MRPL12P52815 198 aaKnown RBP22.64■■□□□ 1.21
NDUFS3-202ENST00000524568 SART3Q15020 963 aaKnown RBP22.64■■□□□ 1.21
NDUFS3-202ENST00000524568 NECTIN1Q15223 517 aa22.64■■□□□ 1.21
NDUFS3-202ENST00000524568 STXBP2Q15833 593 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms