RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 RAB11FIP4Q86YS3 637 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 BLIDQ8IZY5 108 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 CCDC82Q8N4S0 544 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 OGFOD1Q8N543 542 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 RRP36Q96EU6 259 aaKnown RBP8.59□□□□□ -1.03
CTR9-202ENST00000524523 AIFM3Q96NN9 605 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 GMLQ99445 158 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 PANK2Q9BZ23 570 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 ZMYND12Q9H0C1 365 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 PCDHA4Q9UN74 947 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 STX8Q9UNK0 236 aa8.59□□□□□ -1.03
CTR9-202ENST00000524523 MYH2Q9UKX2 1941 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 LAMB1P07942 1786 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 SMIM22K7EJ46 135 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 M0R2N6 131 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 PPIP5K2O43314 1243 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 NMT2O60551 498 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 GNRH1P01148 92 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 POLD1P28340 1107 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 CHRNA5P30532 468 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 PRPHP41219 470 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 ZNF165P49910 485 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 NDUFA8P51970 172 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 NLRP5P59047 1200 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 CEBPZQ03701 1054 aaKnown RBP8.58□□□□□ -1.04
CTR9-202ENST00000524523 ZRSR1Q15695 479 aaKnown RBP8.58□□□□□ -1.04
CTR9-202ENST00000524523 NPY5RQ15761 445 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 STX1AQ16623 288 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 STK11IPQ8N1F8 1099 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 TRIML1Q8N9V2 468 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 PLPP7Q8NBV4 271 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 RNF217Q8TC41 542 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 CEP95Q96GE4 821 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 GTPBP4Q9BZE4 634 aaKnown RBP8.58□□□□□ -1.04
CTR9-202ENST00000524523 MTFR1LQ9H019 292 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 GOLPH3LQ9H4A5 285 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 DBNDD1Q9H9R9 158 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 CABP5Q9NP86 173 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 DDX4Q9NQI0 724 aaKnown RBP8.58□□□□□ -1.04
CTR9-202ENST00000524523 GJB4Q9NTQ9 266 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 GINM1Q9NU53 330 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 CCDC39Q9UFE4 941 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 SAP30BPQ9UHR5 308 aaKnown RBP8.58□□□□□ -1.04
CTR9-202ENST00000524523 TUBE1Q9UJT0 475 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 ZNRF3Q9ULT6 936 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 CD2APQ9Y5K6 639 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 MRVI1Q9Y6F6 885 aa8.58□□□□□ -1.04
CTR9-202ENST00000524523 LTBP3Q9NS15 1303 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 DTNBO60941 627 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 PDHBP11177 359 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 PFKFB1P16118 471 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 RPS12P25398 132 aaKnown RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 HOXA7P31268 230 aaPredicted RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 SHMT1P34896 483 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 GPC1P35052 558 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 LONP1P36776 959 aaKnown RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 RNF144AP50876 292 aaPredicted RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 ATP2C1P98194 919 aaPredicted RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 MAP3K10Q02779 954 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 CLN3Q13286 438 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 AOC3Q16853 763 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 NT5DC1Q5TFE4 455 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 SHC4Q6S5L8 630 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 SARM1Q6SZW1 724 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 TMEM179Q6ZVK1 233 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 KRT25Q7Z3Z0 450 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 FAM83AQ86UY5 434 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 MTMR8Q96EF0 704 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 NAP1L4Q99733 375 aaKnown RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 FTOQ9C0B1 505 aaKnown RBP eCLIP8.57□□□□□ -1.04
CTR9-202ENST00000524523 C6orf50Q9HD87 102 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 VPS54Q9P1Q0 977 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 SEC63Q9UGP8 760 aaKnown RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 FBXO2Q9UK22 296 aaPredicted RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 KCNH3Q9ULD8 1083 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 KCNJ14Q9UNX9 436 aa8.57□□□□□ -1.04
CTR9-202ENST00000524523 DDX60LQ5H9U9 1706 aaKnown RBP8.57□□□□□ -1.04
CTR9-202ENST00000524523 BAZ2AQ9UIF9 1905 aaKnown RBP8.56□□□□□ -1.04
CTR9-202ENST00000524523 PNMA6FA0A0J9YX94 578 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 A0A1B0GVL5 298 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 POM121CA8CG34 1229 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 SMTNL1A8MU46 457 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 GOLGA6L6A8MZA4 724 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 H3BM21 787 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 IKBKBO14920 756 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 SLC26A4O43511 780 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 C21orf2O43822 256 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 MYL1P05976 194 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 VEGFBP49765 207 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 SCNN1DP51172 638 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 PTSQ03393 145 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 ZNF543Q08ER8 600 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 TNIP1Q15025 636 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 CAMK4Q16566 473 aa8.56□□□□□ -1.04
CTR9-202ENST00000524523 CERKLQ49MI3 558 aaPredicted RBP8.56□□□□□ -1.04
CTR9-202ENST00000524523 OLFM4Q6UX06 510 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms